6PIX
Crystal structure of HCV NS3/4A D168A protease in complex with P4-P5-5 (WK-25)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | NS3/4A protease | polymer | 220 | 23348.4 | 1 | UniProt (A0A0B4WYC6) Pfam (PF02907) In PDB | Hepacivirus C | |
2 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
3 | A | methyl (1-{[(2R,6S,12Z,13aS,14aR,16aS)-2-[(7-methoxy-3-methyl-5,8-dihydroquinoxalin-2-yl)oxy]-14a-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl]carbamoyl}cyclopentyl)carbamate | non-polymer | 826.0 | 1 | Chemie (OLY) | |||
4 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
5 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
6 | water | water | 18.0 | 180 | Chemie (HOH) |
Sequence modifications
A: 1004 - 1182 (UniProt: A0A0B4WYC6)
PDB | External Database | Details |
---|---|---|
Met 963 | - | initiating methionine |
Gly 964 | - | expression tag |
Ser 965 | - | expression tag |
Ser 966 | - | expression tag |
His 967 | - | expression tag |
His 968 | - | expression tag |
His 969 | - | expression tag |
His 970 | - | expression tag |
His 971 | - | expression tag |
His 972 | - | expression tag |
Ser 973 | - | expression tag |
Ser 974 | - | expression tag |
Gly 975 | - | expression tag |
Leu 976 | - | expression tag |
Val 977 | - | expression tag |
Pro 978 | - | expression tag |
Arg 979 | - | expression tag |
Gly 980 | - | expression tag |
Ser 981 | - | expression tag |
His 982 | - | expression tag |
Met 983 | - | expression tag |
Ala 984 | - | expression tag |
Ser 985 | - | expression tag |
Met 986 | - | expression tag |
Lys 987 | - | expression tag |
Lys 988 | - | expression tag |
Lys 989 | - | expression tag |
Gly 990 | - | expression tag |
Ser 991 | - | expression tag |
Val 992 | - | expression tag |
Val 993 | - | expression tag |
Ile 994 | - | expression tag |
Val 995 | - | expression tag |
Gly 996 | - | expression tag |
Arg 997 | - | expression tag |
Ile 998 | - | expression tag |
Asn 999 | - | expression tag |
Leu 1000 | - | expression tag |
Ser 1001 | - | expression tag |
Gly 1002 | - | expression tag |
Asp 1003 | - | expression tag |
Glu 1013 | Leu 13 | conflict |
Glu 1014 | Leu 14 | conflict |
Gln 1017 | Ile 17 | conflict |
Glu 1018 | Ile 18 | conflict |
Gln 1021 | Leu 21 | conflict |
Ser 1047 | Cys 47 | conflict |
Leu 1052 | Cys 52 | conflict |
Thr 1072 | Ile 72 | conflict |
Gln 1086 | Pro 86 | conflict |
Ser 1159 | Cys 159 | conflict |
Ala 1168 | Asp 168 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 23348.4 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 1049.5 | |
All* | Total formula weight | 24397.9 |