6PD5
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 6.5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Hemagglutinin | polymer | 527 | 59893.3 | 1 | UniProt (Q1KHJ8) Pfam (PF00509) | Influenza A virus (A/chicken/Vietnam/4/2003(H5N1)) | |
| 2 | B, C, D, E, F... (A) | SULFATE ION | non-polymer | 96.1 | 11 | Chemie (SO4) | |||
| 3 | M, N, O (A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 4 | P, Q, R, S (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 5 | T (A) | water | water | 18.0 | 105 | Chemie (HOH) |
Sequence modifications
A: 11 - 1042 (UniProt: Q1KHJ8)
| PDB | External Database | Details |
|---|---|---|
| Leu -4 | - | expression tag |
| Leu -3 | - | expression tag |
| Ala -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Ala 0 | - | expression tag |
| Ala 1 | - | expression tag |
| His 2 | - | expression tag |
| Ser 3 | - | expression tag |
| Ala 4 | - | expression tag |
| Phe 5 | - | expression tag |
| Ala 6 | - | expression tag |
| Ala 7 | - | expression tag |
| Asp 8 | - | expression tag |
| Pro 9 | - | expression tag |
| Gly 10 | - | expression tag |
| Ser 1043 | - | expression tag |
| Arg 1044 | - | expression tag |
| Leu 1045 | - | expression tag |
| Val 1046 | - | expression tag |
| Pro 1047 | - | expression tag |
| Arg 1048 | - | expression tag |
| Gly 1049 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 59893.3 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 2217.8 | |
| All* | Total formula weight | 62111.1 |
