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6P81

Structure of DNA polymerase III, beta subunit/ beta sliding clamp from Klebsiella pneumoniae, expressed with an N-terminal His-Smt3 fusion tag, in complex with Griselimycin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Ubiquitin-like protein SMT3,Beta sliding clamppolymer46251735.01UniProt (Q12306)
UniProt (W1BGQ6)
Pfam (PF00240)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
2B
(B)
Griselimycinpolymer111115.41BIRD (PRD_002311)Streptomyces caelicus
3C
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
4D
(A)
1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANEnon-polymer178.21Chemie (PG5)
5E
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
6F
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
7G, H
(A, B)
waterwater18.0398Chemie (HOH)
Sequence modifications
A: -85 - 0 (UniProt: Q12306)
PDBExternal DatabaseDetails
Met -95-initiating methionine
Gly -94-expression tag
His -93-expression tag
His -92-expression tag
His -91-expression tag
His -90-expression tag
His -89-expression tag
His -88-expression tag
Ser -87-expression tag
Gly -86-expression tag
A: 1 - 366 (UniProt: W1BGQ6)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight52850.4
Non-Polymers*Number of molecules4
Total formula weight312.8
All*Total formula weight53163.2
*Water molecules are not included.

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PDB entries from 2025-12-24

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