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6P6V

HCV NS3/4A protease domain of genotype 5a in complex with glecaprevir

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ANon-structural protein 4A,Serine protease NS3polymer20321370.41UniProt (O91936)
Pfam (PF02907)
In PDB
Hepatitis C virus genotype 5a (isolate SA13) (HCV)
2AZINC IONnon-polymer65.41Chemie (ZN)
3ACHLORIDE IONnon-polymer35.51Chemie (CL)
4A1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
5A(3aR,7S,10S,12R,21E,24aR)-7-tert-butyl-N-[(1R,2R)-2-(difluoromethyl)-1-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}cyclop ropyl]-20,20-difluoro-5,8-dioxo-2,3,3a,5,6,7,8,11,12,20,23,24a-dodecahydro-1H,10H-9,12-methanocyclopenta[18,19][1,10,17, 3,6]trioxadiazacyclononadecino[11,12-b]quinoxaline-10-carboxamidenon-polymer838.91Chemie (O31)
6waterwater18.0225Chemie (HOH)
Sequence modifications
A: 990 - 1000 (UniProt: O91936)
PDBExternal DatabaseDetails
Gly 980-expression tag
Ser 981-expression tag
His 982-expression tag
Met 983-expression tag
Ala 984-expression tag
Ser 985-expression tag
Met 986-expression tag
Lys 987-expression tag
Lys 988-expression tag
Lys 989-expression tag
A: 1004 - 1182 (UniProt: O91936)
PDBExternal DatabaseDetails
Ser 1001-linker
Gly 1002-linker
Asp 1003-linker
Glu 1013Val 1040engineered mutation
Glu 1014Leu 1041engineered mutation
Gln 1017Ile 1044engineered mutation
Glu 1018Ile 1045engineered mutation
Gln 1021Leu 1048engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight21370.4
Non-Polymers*Number of molecules4
Total formula weight1001.8
All*Total formula weight22372.2
*Water molecules are not included.

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PDB entries from 2024-07-10

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