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6OZP

Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 180 min soak in 10 mM Mn2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Endonuclease Vpolymer24527207.52UniProt (Q8C9A2)
Pfam (PF04493)
Mus musculus (Mouse)
2C, E
(c, d)
DNA/RNA (5'-R(*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*A)-3')polymer113474.22synthetic construct
3D, F
(C, D)
RNA (5'-R(P*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3')polymer123774.32synthetic construct
4AA, BA, CA, DA, G...
(C, D, A, B)
MANGANESE (II) IONnon-polymer54.911Chemie (MN)
5J, K
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
6L, U
(A, B)
TETRAETHYLENE GLYCOLnon-polymer194.22Chemie (PG4)
7M, N, O, V, W...
(A, B)
1,2-ETHANEDIOLnon-polymer62.16Chemie (EDO)
8P, Q, Y
(A, B)
TRIETHYLENE GLYCOLnon-polymer150.23Chemie (PGE)
9EA, FA, GA, HA, IA...
(A, B, c, C, d...)
waterwater18.0320Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight68911.9
Non-Polymers*Number of molecules24
Total formula weight1999.9
All*Total formula weight70911.8
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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