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6OUV

1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Deinococcus radiodurans with methylacetylphosphonate (MAP) bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
1-deoxy-D-xylulose-5-phosphate synthasepolymer65070029.52UniProt (Q9RUB5)
Pfam (PF13292)
Pfam (PF02779)
Pfam (PF02780)
Deinococcus radiodurans1-deoxyxylulose-5-phosphate synthase,DXPS
2C, F
(A, B)
3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUMnon-polymer563.42Chemie (TDK)
3D, G
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
4E, H
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
5I, J
(A, B)
waterwater18.0607Chemie (HOH)
Sequence modifications
A, B: 1 - 629 (UniProt: Q9RUB5)
PDBExternal DatabaseDetails
Met -20-initiating methionine
Gly -19-expression tag
Ser -18-expression tag
Ser -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Leu -7-expression tag
Val -6-expression tag
Pro -5-expression tag
Arg -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
Met 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight140059.0
Non-Polymers*Number of molecules6
Total formula weight1221.3
All*Total formula weight141280.4
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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