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6OO2

Vps4 with Cyclic Peptide Bound in the Central Pore

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...Vacuolar protein sorting-associated protein 4polymer33737120.86UniProt (P52917)
Pfam (PF00004)
Pfam (PF17862)
Pfam (PF09336)
In PDB
Saccharomyces cerevisiae (Baker's yeast)Vps4, DOA4-independent degradation protein 6, Protein END13, Vacuolar protein-targeting protein 10
2GDesigned Cyclic Peptidepolymer302660.01synthetic construct
3H, I, J, K, L...Vacuolar protein sorting-associated protein VTA1polymer515773.612UniProt (Q06263)
Pfam (PF18097)
In PDB
Saccharomyces cerevisiae (Baker's yeast)VPS20-associated protein 1
4D, E, A, B, CADENOSINE-5'-DIPHOSPHATEnon-polymer427.25Chemie (ADP)
5C, A, BBERYLLIUM TRIFLUORIDE IONnon-polymer66.03Chemie (BEF)
6C, D, A, BMAGNESIUM IONnon-polymer24.34Chemie (MG)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains19
Total formula weight294668.3
Non-Polymers*Number of molecules12
Total formula weight2431.2
All*Total formula weight297099.6
*Water molecules are not included.

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PDB entries from 2024-05-01

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