6OJD
A high-resolution crystal structure of covalent complex of NocB thioesterase domain with fluorophosphonate nocardicin G analog
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | NocB | polymer | 257 | 27743.9 | 4 | UniProt (Q5J1Q6) Pfam (PF00975) In PDB | Nocardia uniformis subsp. tsuyamanensis | |
2 | A, B, C, D | GLYCEROL | non-polymer | 92.1 | 12 | Chemie (GOL) | |||
3 | A, B, C, D | (R)-[(S)-[(3S)-3-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-2-oxoazetidin-1-yl](4-hydroxyphenyl)methyl]methylphosphinic acid | non-polymer | 419.4 | 4 | Chemie (MUY) | |||
4 | A, B, C | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
5 | water | water | 18.0 | 390 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1690 - 1925 (UniProt: Q5J1Q6)
PDB | External Database | Details |
---|---|---|
Met 1669 | - | initiating methionine |
Gly 1670 | - | expression tag |
Ser 1671 | - | expression tag |
Ser 1672 | - | expression tag |
His 1673 | - | expression tag |
His 1674 | - | expression tag |
His 1675 | - | expression tag |
His 1676 | - | expression tag |
His 1677 | - | expression tag |
His 1678 | - | expression tag |
Ser 1679 | - | expression tag |
Ser 1680 | - | expression tag |
Gly 1681 | - | expression tag |
Leu 1682 | - | expression tag |
Val 1683 | - | expression tag |
Pro 1684 | - | expression tag |
Arg 1685 | - | expression tag |
Gly 1686 | - | expression tag |
Ser 1687 | - | expression tag |
His 1688 | - | expression tag |
Met 1689 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 110975.5 | |
Non-Polymers* | Number of molecules | 20 |
Total formula weight | 2942.9 | |
All* | Total formula weight | 113918.4 |