6O83
S. pombe ubiquitin E1~ubiquitin-AMP tetrahedral intermediate mimic
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Ubiquitin-activating enzyme E1 1 | polymer | 1001 | 111764.0 | 2 | UniProt (O94609) Pfam (PF00899) Pfam (PF16190) Pfam (PF16191) Pfam (PF10585) Pfam (PF09358) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | Poly(A)+ RNA transport protein 3 |
| 2 | B, D (B, D) | Ubiquitin-60S ribosomal protein L40 | polymer | 75 | 8511.7 | 2 | UniProt (P0CH07) Pfam (PF00240) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 3 | E, M (A, C) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 4 | F, N (A, C) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 2 | Chemie (TRS) | |||
| 5 | G, H, I, J, K... (A, C) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 11 | Chemie (MPD) | |||
| 6 | L, U (A, C) | 5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosine | non-polymer | 387.4 | 2 | Chemie (VMX) | |||
| 7 | V, W, X, Y (A, B, C, D) | water | water | 18.0 | 37 | Chemie (HOH) |
Sequence modifications
A, C: 13 - 1012 (UniProt: O94609)
| PDB | External Database | Details |
|---|---|---|
| Ser 12 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 240551.5 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 2399.2 | |
| All* | Total formula weight | 242950.7 |
