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6O7E

Cryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with AMPPNP in type III-A CRISPR-Cas system

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Csm1polymer79189682.51UniProt (B6YWB8)Thermococcus onnurineus (strain NA1)
2B
(B)
Csm2polymer18721210.31UniProt (B6YWB9)Thermococcus onnurineus (strain NA1)
3C, D
(C, D)
Csm3polymer29132809.02UniProt (B6YWC0)Thermococcus onnurineus (strain NA1)
4E
(E)
Csm4polymer28932345.11UniProt (B6YWC1)Thermococcus onnurineus (strain NA1)
5F
(G)
RNA (38-MER)polymer3812463.41Thermococcus onnurineus
6G
(H)
RNA (40-MER)polymer4012750.71Thermococcus onnurineus
7H
(Y)
Csm5polymer37840588.41UniProt (by SIFTS) (B6YWC2)Thermococcus onnurineus NA1
8I, O, P
(A, C, D)
ZINC IONnon-polymer65.43Chemie (ZN)
9J, K
(A)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.22Chemie (ANP)
10L, M, N
(A)
MANGANESE (II) IONnon-polymer54.93Chemie (MN)
Sequence modifications
A: 1 - 777 (UniProt: B6YWB8)
PDBExternal DatabaseDetails
Met -13-initiating methionine
Gly -12-expression tag
Ser -11-expression tag
Ser -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
Ser -3-expression tag
Gln -2-expression tag
Asp -1-expression tag
Pro 0-expression tag
Ala 14His 14engineered mutation
Asn 15Asp 15engineered mutation
B: 1 - 186 (UniProt: B6YWB9)
PDBExternal DatabaseDetails
Ser 0-expression tag
C, D: 1 - 290 (UniProt: B6YWC0)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight274658.4
Non-Polymers*Number of molecules8
Total formula weight1373.4
All*Total formula weight276031.9
*Water molecules are not included.

249697

PDB entries from 2026-02-25

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