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6O7E

Cryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with AMPPNP in type III-A CRISPR-Cas system

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ACsm1polymer79189682.51UniProt (B6YWB8)
Pfam (PF01966)
Pfam (PF18211)
Pfam (PF22335)
In PDB
Thermococcus onnurineus (strain NA1)
2BCsm2polymer18721210.31UniProt (B6YWB9)
Pfam (PF03750)
In PDB
Thermococcus onnurineus (strain NA1)
3C, DCsm3polymer29132809.02UniProt (B6YWC0)
Pfam (PF03787)
In PDB
Thermococcus onnurineus (strain NA1)
4ECsm4polymer28932345.11UniProt (B6YWC1)
In PDB
Thermococcus onnurineus (strain NA1)
5GRNA (38-MER)polymer3812463.41Thermococcus onnurineus
6HRNA (40-MER)polymer4012750.71Thermococcus onnurineus
7YCsm5polymer37840588.41Pfam (PF03787)
UniProt (by SIFTS) (B6YWC2)
In PDB
Thermococcus onnurineus NA1
8A, C, DZINC IONnon-polymer65.43Chemie (ZN)
9APHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.22Chemie (ANP)
10AMANGANESE (II) IONnon-polymer54.93Chemie (MN)
Sequence modifications
A: 1 - 777 (UniProt: B6YWB8)
PDBExternal DatabaseDetails
Met -13-initiating methionine
Gly -12-expression tag
Ser -11-expression tag
Ser -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
Ser -3-expression tag
Gln -2-expression tag
Asp -1-expression tag
Pro 0-expression tag
Ala 14His 14engineered mutation
Asn 15Asp 15engineered mutation
B: 1 - 186 (UniProt: B6YWB9)
PDBExternal DatabaseDetails
Ser 0-expression tag
C, D: 1 - 290 (UniProt: B6YWC0)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight274658.4
Non-Polymers*Number of molecules8
Total formula weight1373.4
All*Total formula weight276031.9
*Water molecules are not included.

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PDB entries from 2024-07-24

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