6NRW
Crystal structure of Dpr1 IG1 bound to DIP-eta IG1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | DPR1 | polymer | 114 | 13238.8 | 2 | UniProt (Q8T603) Pfam (PF07686) | Drosophila melanogaster (Fruit fly) | |
| 2 | B, D (B, D) | Dpr-interacting protein eta, isoform B | polymer | 112 | 12940.9 | 2 | UniProt (Q9VMN9) Pfam (PF07679) | Drosophila melanogaster (Fruit fly) | Dpr-interacting protein eta,isoform D |
| 3 | E (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 4 | F (F) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 5 | G (G) | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 716.7 | 1 | In PDB GlyTouCan (G63564LA) | |||
| 6 | H (H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 7 | I, J, L (B, D) | SULFATE ION | non-polymer | 96.1 | 3 | Chemie (SO4) | |||
| 8 | K (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 9 | M, N, O, P (A, B, C, D) | water | water | 18.0 | 84 | Chemie (HOH) |
Sequence modifications
A, C: 51 - 155 (UniProt: Q8T603)
B, D: 40 - 143 (UniProt: Q9VMN9)
| PDB | External Database | Details |
|---|---|---|
| Ala 48 | - | expression tag |
| Asp 49 | - | expression tag |
| Pro 50 | - | expression tag |
| His 156 | - | expression tag |
| His 157 | - | expression tag |
| His 158 | - | expression tag |
| His 159 | - | expression tag |
| His 160 | - | expression tag |
| His 161 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 38 | - | expression tag |
| Arg 39 | - | expression tag |
| His 144 | - | expression tag |
| His 145 | - | expression tag |
| His 146 | - | expression tag |
| His 147 | - | expression tag |
| His 148 | - | expression tag |
| His 149 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 52359.5 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2444.3 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 509.4 | |
| All* | Total formula weight | 55313.2 |
