6NPR
Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | H-2 class I histocompatibility antigen, D-D alpha chain | polymer | 276 | 32090.7 | 2 | UniProt (P01900) Pfam (PF00129) Pfam (PF07654) | Mus musculus (Mouse) | H-2D(D) |
| 2 | B, D (B, D) | Beta-2-microglobulin | polymer | 100 | 11879.4 | 2 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (Human) | |
| 3 | E, F (P, R) | ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE | polymer | 10 | 1075.3 | 2 | UniProt (by SIFTS) (P04578) | Human immunodeficiency virus 1 | |
| 4 | G, H, I, J, K (A, B, C, D, P) | water | water | 18.0 | 179 | Chemie (HOH) |
Sequence modifications
A, C: 2 - 277 (UniProt: P01900)
B, D: 2 - 100 (UniProt: P61769)
| PDB | External Database | Details |
|---|---|---|
| Cys 84 | Tyr 108 | conflict |
| Ser 121 | Cys 145 | conflict |
| Cys 139 | Ala 163 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 90090.6 | |
| All* | Total formula weight | 90090.6 |
