6NPR
Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-B |
| Synchrotron site | APS |
| Beamline | 23-ID-B |
| Temperature [K] | 63 |
| Detector technology | PIXEL |
| Collection date | 2018-11-09 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 66.990, 105.330, 117.270 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 78.362 - 2.370 |
| R-factor | 0.1817 |
| Rwork | 0.178 |
| R-free | 0.25090 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1qo3 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.978 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 78.362 | 2.460 |
| High resolution limit [Å] | 2.370 | 2.370 |
| Rmerge | 0.130 | 0.660 |
| Number of reflections | 34489 | 3576 |
| <I/σ(I)> | 13.2 | 4 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 12.6 | 11.8 |
| CC(1/2) | 0.990 | 0.880 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2M Ammonium acetate, 0.1M Bis-Tris (5.5) and 25%PEG 3350 |






