6NPP
Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Epstein-Barr nuclear antigen 1 | polymer | 141 | 15306.7 | 1 | UniProt (P03211) Pfam (PF02905) | Epstein-Barr virus (strain B95-8) | EBV nuclear antigen 1 |
| 2 | B (B) | EBNA1 | polymer | 134 | 14651.0 | 1 | UniProt (A0A0P0J719) Pfam (PF02905) UniProt (by SIFTS) (P03211) | Epstein-Barr virus (strain B95-8) | |
| 3 | C (B) | 3-(phenylethynyl)-2-(1H-pyrrol-1-yl)benzoic acid | non-polymer | 287.3 | 1 | Chemie (KWG) | |||
| 4 | D, E (A, B) | water | water | 18.0 | 485 | Chemie (HOH) |
Sequence modifications
A: 471 - 607 (UniProt: P03211)
B: 474 - 607 (UniProt: A0A0P0J719)
| PDB | External Database | Details |
|---|---|---|
| Ser 467 | - | expression tag |
| His 468 | - | expression tag |
| Met 469 | - | expression tag |
| Gly 470 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 487 | Val 84 | conflict |
| Asp 499 | Glu 96 | conflict |
| Thr 502 | Asn 99 | conflict |
| Thr 524 | Ile 121 | conflict |
| Ile 528 | Val 125 | conflict |
| Leu 533 | Ile 130 | conflict |
| Arg 594 | Lys 191 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 29957.7 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 287.3 | |
| All* | Total formula weight | 30245.0 |
