6NPP
Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-02-01 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.353, 68.526, 69.897 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.621 - 1.350 |
R-factor | 0.1588 |
Rwork | 0.158 |
R-free | 0.18450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vhi |
RMSD bond length | 0.010 |
RMSD bond angle | 1.027 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.370 |
High resolution limit [Å] | 1.350 | 1.350 |
Number of reflections | 61748 | 2490 |
<I/σ(I)> | 16.5 | 1.1 |
Completeness [%] | 97.0 | 80 |
Redundancy | 9.6 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 50 mM MES pH 6.5, 0-100 mM NaCl, 10 mM DTT |