6NFF
Structure of X-prolyl dipeptidyl aminopeptidase from Lactobacillus helveticus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Xaa-Pro dipeptidyl-peptidase | polymer | 813 | 92641.9 | 1 | UniProt (Q59485) | Lactobacillus helveticus (Lactobacillus suntoryeus) | X-Pro dipeptidyl-peptidase, X-prolyl-dipeptidyl aminopeptidase, X-PDAP |
| 2 | B (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 3 | C, D, E, F (A) | PHOSPHATE ION | non-polymer | 95.0 | 4 | Chemie (PO4) | |||
| 4 | G, H, I, J, K... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 17 | Chemie (EDO) | |||
| 5 | X (A) | water | water | 18.0 | 561 | Chemie (HOH) |
Sequence modifications
A: 1 - 793 (UniProt: Q59485)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Gly 36 | Ser 36 | conflict |
| Arg 347 | Gln 347 | conflict |
| Ser 401 | Leu 401 | conflict |
| Gly 462 | Arg 462 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 92641.9 | |
| Non-Polymers* | Number of molecules | 22 |
| Total formula weight | 1475.1 | |
| All* | Total formula weight | 94117.0 |
