6NFF
Structure of X-prolyl dipeptidyl aminopeptidase from Lactobacillus helveticus
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Xaa-Pro dipeptidyl-peptidase | polymer | 813 | 92641.9 | 1 | UniProt (Q59485) Pfam (PF09168) Pfam (PF02129) Pfam (PF08530) In PDB | Lactobacillus helveticus (Lactobacillus suntoryeus) | X-Pro dipeptidyl-peptidase, X-prolyl-dipeptidyl aminopeptidase, X-PDAP |
2 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
3 | A | PHOSPHATE ION | non-polymer | 95.0 | 4 | Chemie (PO4) | |||
4 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 17 | Chemie (EDO) | |||
5 | water | water | 18.0 | 561 | Chemie (HOH) |
Sequence modifications
A: 1 - 793 (UniProt: Q59485)
PDB | External Database | Details |
---|---|---|
Met -19 | - | expression tag |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Gly 36 | Ser 36 | conflict |
Arg 347 | Gln 347 | conflict |
Ser 401 | Leu 401 | conflict |
Gly 462 | Arg 462 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 92641.9 | |
Non-Polymers* | Number of molecules | 22 |
Total formula weight | 1475.1 | |
All* | Total formula weight | 94117.0 |