6NE3
Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h bound at SHL-2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E (A, E) | Histone H3.2 | polymer | 136 | 15435.1 | 2 | UniProt (P84233) Pfam (PF00125) | Xenopus laevis (African clawed frog) | Histone H3 |
2 | B, F (B, F) | Histone H4 | polymer | 103 | 11394.4 | 2 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
3 | C, G (C, G) | Histone H2A type 1 | polymer | 130 | 14093.4 | 2 | UniProt (P06897) Pfam (PF00125) Pfam (PF16211) | Xenopus laevis (African clawed frog) | |
4 | D (D) | Histone H2B | polymer | 99 | 11180.0 | 1 | UniProt (A0A1L8FQ56) Pfam (PF00125) UniProt (by SIFTS) (P02281) | Xenopus laevis (African clawed frog) | |
5 | H (H) | Histone H2B | polymer | 93 | 10348.9 | 1 | UniProt (A0A1L8FQ56) Pfam (PF00125) UniProt (by SIFTS) (P02281) | Xenopus laevis (African clawed frog) | |
6 | I (J) | DNA (156-MER) | polymer | 156 | 47936.5 | 1 | Xenopus laevis (African clawed frog) | ||
7 | J (I) | DNA (156-MER) | polymer | 156 | 48372.8 | 1 | Xenopus laevis (African clawed frog) | ||
8 | K (W) | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 | polymer | 467 | 54653.3 | 1 | UniProt (O60264) Pfam (PF00176) Pfam (PF00271) | Homo sapiens (Human) | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5,Sucrose nonfermenting protein 2 homolog,hSNF2H |
9 | L (W) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) |
Sequence modifications
A, E: 0 - 135 (UniProt: P84233)
C, G: 0 - 129 (UniProt: P06897)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Arg 99 | Gly 100 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 254337.5 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 427.2 | |
All* | Total formula weight | 254764.7 |