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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6N1D

X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A16S, B16S16S rRNApolymer1518492773.72GenBank (46197919)Thermus thermophilus HB27
2A23S, B23S23S rRNApolymer2881937014.72Thermus thermophilus HB27
3A5S, B5S5s rRNApolymer11938553.02GenBank (46197919)Thermus thermophilus HB27
4AL01, BL0150S ribosomal protein L1polymer22824741.52UniProt (A0A1J1EJ43)
Pfam (PF00687)
UniProt (by SIFTS) (Q72GV9)
In PDB		Thermus thermophilus
5AL02, BL0250S ribosomal protein L2polymer27630532.62UniProt (Q72I07)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermus thermophilus HB27
6AL03, BL0350S ribosomal protein L3polymer20622450.22UniProt (Q72I04)
Pfam (PF00297)
In PDB		Thermus thermophilus HB27
7AL04, BL0450S ribosomal protein L4polymer20522744.32UniProt (Q72I05)
Pfam (PF00573)
In PDB		Thermus thermophilus HB27
8AL05, BL0550S ribosomal protein L5polymer18120944.42UniProt (Q72I16)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
9AL06, BL0650S ribosomal protein L6polymer18019568.92UniProt (Q72I19)
Pfam (PF00347)
In PDB		Thermus thermophilus HB27
10AL09, BL0950S ribosomal protein L9polymer14816436.22UniProt (Q72GV5)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Thermus thermophilus HB27
11AL13, BL1350S ribosomal protein L13polymer14015927.92UniProt (Q72IN1)
Pfam (PF00572)
In PDB		Thermus thermophilus HB27
12AL14, BL1450S ribosomal protein L14polymer12213309.62UniProt (Q72I14)
Pfam (PF00238)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
13AL15, BL1550S ribosomal protein L15polymer15016319.12UniProt (Q72I23)
Pfam (PF00828)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
14AL16, BL1650S ribosomal protein L16polymer14115977.92UniProt (Q72I11)
Pfam (PF00252)
In PDB		Thermus thermophilus HB27
15AL17, BL1750S ribosomal protein L17polymer11813750.12UniProt (Q72I33)
Pfam (PF01196)
In PDB		Thermus thermophilus HB27
16AL18, BL1850S ribosomal protein L18polymer11112508.62UniProt (Q72I20)
Pfam (PF00861)
In PDB		Thermus thermophilus HB27
17AL19, BL1950S ribosomal protein L19polymer14617217.92UniProt (Q72JU9)
Pfam (PF01245)
In PDB		Thermus thermophilus HB27
18AL20, BL2050S ribosomal protein L20polymer11813779.32UniProt (Q72L76)
Pfam (PF00453)
In PDB		Thermus thermophilus HB27
19AL21, BL2150S ribosomal protein L21polymer10111069.22UniProt (Q72HR2)
Pfam (PF00829)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
20AL22, BL2250S ribosomal protein L22polymer11312808.12UniProt (Q72I09)
Pfam (PF00237)
In PDB		Thermus thermophilus HB27
21AL23, BL2350S ribosomal protein L23polymer9610759.82UniProt (Q72I06)
Pfam (PF00276)
In PDB		Thermus thermophilus HB27
22AL24, BL2450S ribosomal protein L24polymer11012085.62UniProt (Q72I15)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Thermus thermophilus HB27
23AL25, BL2550S ribosomal protein L25polymer20623238.62UniProt (Q72IA7)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Thermus thermophilus HB27General stress protein CTC
24AL27, BL2750S ribosomal protein L27polymer849397.92UniProt (P60493)
Pfam (PF01016)
UniProt (by SIFTS) (Q72HR3)
In PDB		Thermus thermophilus
25AL28, BL2850S ribosomal protein L28polymer9811032.22UniProt (Q72G84)
Pfam (PF00830)
In PDB		Thermus thermophilus HB27
26AL29, BL2950S ribosomal protein L29polymer728670.32UniProt (Q72I12)
Pfam (PF00831)
In PDB		Thermus thermophilus HB27
27AL30, BL3050S ribosomal protein L30polymer606799.12UniProt (Q72I22)
Pfam (PF00327)
In PDB		Thermus thermophilus HB27
28AL31, BL3150S ribosomal protein L31polymer718300.52UniProt (Q72JR0)
Pfam (PF01197)
In PDB		Thermus thermophilus HB27
29AL32, BL3250S ribosomal protein L32polymer596590.92UniProt (P80339)
Pfam (PF01783)
UniProt (by SIFTS) (P62652)
In PDB		Thermus thermophilus
30AL33, BL3350S ribosomal protein L33polymer546632.92UniProt (Q72GW3)
Pfam (PF00471)
In PDB		Thermus thermophilus HB27
31AL34, BL3450S ribosomal protein L34polymer496132.42UniProt (P80340)
Pfam (PF00468)
In PDB		Thermus thermophilus
32AL35, BL3550S ribosomal protein L35polymer647375.02UniProt (Q72L77)
Pfam (PF01632)
In PDB		Thermus thermophilus HB27
33AL36, BL3650S ribosomal protein L36polymer374435.42UniProt (Q72I28)
Pfam (PF00444)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
34AMRN, BMRNmRNApolymer175562.42synthetic construct
35APTN, BPTNP-tRNApolymer7624616.82Escherichia coli
36AS02, BS0230S ribosomal protein S2polymer25529186.52UniProt (P62662)
Pfam (PF00318)
In PDB		Thermus thermophilus HB27
37AS03, BS0330S ribosomal protein S3polymer23826619.92UniProt (P62663)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermus thermophilus HB27
38AS04, BS0430S ribosomal protein S4polymer20824242.32UniProt (P62664)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
39AS05, BS0530S ribosomal protein S5polymer16117452.22UniProt (P62665)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Thermus thermophilus HB27
40AS06, BS0630S ribosomal protein S6polymer10111988.82UniProt (P62666)
Pfam (PF01250)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
41AS07, BS0730S ribosomal protein S7polymer15517919.82UniProt (P62667)
Pfam (PF00177)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
42AS08, BS0830S ribosomal protein S8polymer13815868.62UniProt (P62668)
Pfam (PF00410)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
43AS09, BS0930S ribosomal protein S9polymer12814429.72UniProt (P62669)
Pfam (PF00380)
In PDB		Thermus thermophilus HB27
44AS10, BS1030S ribosomal protein S10polymer10411823.82UniProt (P62653)
Pfam (PF00338)
In PDB		Thermus thermophilus HB27
45AS11, BS1130S ribosomal protein S11polymer12813606.72UniProt (P62654)
Pfam (PF00411)
In PDB		Thermus thermophilus HB27
46AS12, BS1230S ribosomal protein S12polymer13114506.22UniProt (P61941)
Pfam (PF00164)
In PDB		Thermus thermophilus HB27
47AS13, BS1330S ribosomal protein S13polymer12514207.72UniProt (P62655)
Pfam (PF00416)
In PDB		Thermus thermophilus HB27
48AS14, BS1430S ribosomal protein S14 type Zpolymer607027.52UniProt (P62656)
Pfam (PF00253)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
49AS15, BS1530S ribosomal protein S15polymer8810447.22UniProt (P62657)
Pfam (PF00312)
In PDB		Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
50AS16, BS1630S ribosomal protein S16polymer8810410.02UniProt (P62238)
Pfam (PF00886)
In PDB		Thermus thermophilus HB27
51AS17, BS1730S ribosomal protein S17polymer10412193.52UniProt (P62658)
Pfam (PF00366)
In PDB		Thermus thermophilus HB27
52AS18, BS1830S ribosomal protein S18polymer8710127.12UniProt (P62659)
Pfam (PF01084)
In PDB		Thermus thermophilus HB27
53AS19, BS1930S ribosomal protein S19polymer9210474.32UniProt (P62660)
Pfam (PF00203)
In PDB		Thermus thermophilus HB27
54AS20, BS2030S ribosomal protein S20polymer10511590.92UniProt (P62661)
Pfam (PF01649)
In PDB		Thermus thermophilus HB27
55ATHX, BTHX30S ribosomal protein Thxpolymer263218.82UniProt (P62613)
Pfam (PF17070)
In PDB		Thermus thermophilus HB27
56BATNA tRNApolymer8527544.71Escherichia coli
57A16S, A23S, AL21, B16S, B23S...MAGNESIUM IONnon-polymer24.3359Chemie (MG)
58BS04, AS04IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains111
Total formula weight4442340.9
Non-Polymers*Number of molecules361
Total formula weight9428.8
All*Total formula weight4451769.7
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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