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6MQ8

Binary structure of DNA polymerase eta in complex with templating hypoxanthine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase etapolymer43949211.31UniProt (Q9Y253)
Pfam (PF00817)
Pfam (PF21704)
Pfam (PF11799)
Homo sapiens (Human)RAD30 homolog A,Xeroderma pigmentosum variant type protein
2B
(T)
DNA (5'-D(*CP*AP*TP*IP*AP*TP*GP*AP*CP*GP*CP*T)-3')polymer123647.41synthetic construct
3C
(P)
DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3')polymer82426.61synthetic construct
4D
(A)
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidinenon-polymer466.21Chemie (0KX)
5E, F
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6G, H
(A, P)
SODIUM IONnon-polymer23.02Chemie (NA)
7I, J, K
(A, T, P)
waterwater18.0365Chemie (HOH)
Sequence modifications
A: 3 - 432 (UniProt: Q9Y253)
PDBExternal DatabaseDetails
Met -6-initiating methionine
Ala -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
His 1-expression tag
Gly 2-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight55285.3
Non-Polymers*Number of molecules5
Total formula weight560.8
All*Total formula weight55846.1
*Water molecules are not included.

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PDB entries from 2024-11-13

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