6MQ8
Binary structure of DNA polymerase eta in complex with templating hypoxanthine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | DNA polymerase eta | polymer | 439 | 49211.3 | 1 | UniProt (Q9Y253) Pfam (PF00817) Pfam (PF21704) Pfam (PF11799) | Homo sapiens (Human) | RAD30 homolog A,Xeroderma pigmentosum variant type protein |
2 | B (T) | DNA (5'-D(*CP*AP*TP*IP*AP*TP*GP*AP*CP*GP*CP*T)-3') | polymer | 12 | 3647.4 | 1 | synthetic construct | ||
3 | C (P) | DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3') | polymer | 8 | 2426.6 | 1 | synthetic construct | ||
4 | D (A) | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine | non-polymer | 466.2 | 1 | Chemie (0KX) | |||
5 | E, F (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
6 | G, H (A, P) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
7 | I, J, K (A, T, P) | water | water | 18.0 | 365 | Chemie (HOH) |
Sequence modifications
A: 3 - 432 (UniProt: Q9Y253)
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
Ala -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
Gly 2 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 55285.3 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 560.8 | |
All* | Total formula weight | 55846.1 |