6MQ8
Binary structure of DNA polymerase eta in complex with templating hypoxanthine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 |
Unit cell lengths | 98.539, 98.539, 81.664 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.270 - 1.969 |
R-factor | 0.1732 |
Rwork | 0.171 |
R-free | 0.20760 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.000 |
High resolution limit [Å] | 1.970 | 5.350 | 1.970 |
Rmerge | 0.083 | 0.043 | 0.534 |
Rmeas | 0.093 | 0.048 | 0.596 |
Rpim | 0.040 | 0.020 | 0.257 |
Total number of observations | 162166 | ||
Number of reflections | 31977 | 1652 | 1580 |
<I/σ(I)> | 5.9 | ||
Completeness [%] | 99.9 | 99.8 | 100 |
Redundancy | 5.1 | 5.1 | 5.1 |
CC(1/2) | 0.998 | 0.781 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291.15 | 100mM MES 5.5, 10% PEG 2K MME, 5mM MgSO4 |