6MKR
5287 TCR bound to IAb Padi4
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | H-2 class II histocompatibility antigen, A-B alpha chain | polymer | 179 | 20242.6 | 1 | UniProt (P14434) Pfam (PF00993) Pfam (PF07654) | Mus musculus (Mouse) | IAalpha |
| 2 | B (D) | Padi 4 (92-105) peptide and MHC Class II IAb beta chain | polymer | 217 | 25027.9 | 1 | UniProt (Q9Z183) UniProt (P14483) Pfam (PF00969) Pfam (PF07654) | Mus musculus (Mouse) | |
| 3 | C (A) | 5287 TCR alpha chain | polymer | 208 | 23186.6 | 1 | Mus musculus (Mouse) | ||
| 4 | D (B) | 5287 TCR beta chain | polymer | 239 | 26756.6 | 1 | Mus musculus (Mouse) |
Sequence modifications
D: -26 - -14 (UniProt: Q9Z183)
D: 3 - 191 (UniProt: P14483)
| PDB | External Database | Details |
|---|---|---|
| Gly -12 | - | linker |
| Gly -11 | - | linker |
| Gly -10 | - | linker |
| Gly -9 | - | linker |
| Ser -8 | - | linker |
| Leu -7 | - | linker |
| Val -6 | - | linker |
| Pro -5 | - | linker |
| Arg -4 | - | linker |
| Gly -3 | - | linker |
| Ser -2 | - | linker |
| Gly -1 | - | linker |
| Gly 0 | - | linker |
| Gly 1 | - | linker |
| Gly 2 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 95213.7 | |
| All* | Total formula weight | 95213.7 |
