6MKR
5287 TCR bound to IAb Padi4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-10 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97931 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 257.022, 73.761, 65.207 |
Unit cell angles | 90.00, 90.56, 90.00 |
Refinement procedure
Resolution | 65.204 - 3.355 |
R-factor | 0.2297 |
Rwork | 0.228 |
R-free | 0.26870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4p23 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.742 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 128.500 | 3.540 |
High resolution limit [Å] | 3.350 | 3.350 |
Rmerge | 0.161 | 0.528 |
Rmeas | 0.188 | 0.614 |
Rpim | 0.098 | 0.313 |
Number of reflections | 17652 | 2542 |
<I/σ(I)> | 6.7 | |
Completeness [%] | 99.8 | 99.7 |
Redundancy | 3.6 | 3.8 |
CC(1/2) | 0.987 | 0.904 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 14% PEG 4000, 100mM NaCacodylate, 100 mM NaCitrate |