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6M4U

Crystal structure of FKBP-FRB T2098L mutant in complex with rapamycin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, E)
Peptidyl-prolyl cis-trans isomerase FKBP1Apolymer11012111.82UniProt (P62942)
Pfam (PF00254)
Homo sapiens (Human)PPIase FKBP1A,12 kDa FK506-binding protein,FKBP-12,Calstabin-1,FK506-binding protein 1A,FKBP-1A,Immunophilin FKBP12,Rotamase
2B, D
(B, F)
Serine/threonine-protein kinase mTORpolymer9511447.12UniProt (P42345)
Pfam (PF08771)
Homo sapiens (Human)Mammalian target of rapamycin,mTOR,Mechanistic target of rapamycin
3E, R
(A, E)
RAPAMYCIN IMMUNOSUPPRESSANT DRUGnon-polymer914.22Chemie (RAP)
4AA, F, G, H, K...
(F, A, B, E)
ZINC IONnon-polymer65.414Chemie (ZN)
5BA, I, J, P, Q...
(F, A, B, E)
CHLORIDE IONnon-polymer35.57Chemie (CL)
6X
(F)
GLYCEROLnon-polymer92.11Chemie (GOL)
7CA, DA, EA, FA
(A, B, E, F)
waterwater18.0308Chemie (HOH)
Sequence modifications
A, E: 1 - 108 (UniProt: P62942)
PDBExternal DatabaseDetails
Gly -1-expression tag
Ser 0-expression tag
B, F: 2021 - 2113 (UniProt: P42345)
PDBExternal DatabaseDetails
Gly 2019-expression tag
Ser 2020-expression tag
Leu 2098Thr 2098engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47117.9
Non-Polymers*Number of molecules24
Total formula weight3084.3
All*Total formula weight50202.2
*Water molecules are not included.

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PDB entries from 2025-07-23

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