6LXW
Cryo-EM structure of human secretory immunoglobulin A in complex with the N-terminal domain of SpsA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D (A, B, C, D) | Interleukin-2,Immunoglobulin heavy constant alpha 1 | polymer | 291 | 31445.7 | 4 | UniProt (P60568) UniProt (P01876) Pfam (PF00047) Pfam (PF07654) | Homo sapiens (Human) | IL-2,T-cell growth factor,TCGF,Ig alpha-1 chain C region,Ig alpha-1 chain C region BUR,Ig alpha-1 chain C region TRO |
2 | E (J) | Immunoglobulin J chain | polymer | 167 | 19225.8 | 1 | UniProt (P01591) Pfam (PF15097) | Homo sapiens (Human) | Joining chain of multimeric IgA and IgM |
3 | F (P) | Polymeric immunoglobulin receptor | polymer | 573 | 63306.3 | 1 | UniProt (P01833) Pfam (PF07686) | Homo sapiens (Human) | Poly-Ig receptor,Hepatocellular carcinoma-associated protein TB6 |
4 | G (S) | SigA binding protein | polymer | 317 | 36311.1 | 1 | UniProt (O33753) Pfam (PF05062) | Streptococcus pneumoniae |
Sequence modifications
A, B, C, D: 182 - 202 (UniProt: P60568)
A, B, C, D: 241 - 472 (UniProt: P01876)
J: -22 - 136 (UniProt: P01591)
P: -17 - 547 (UniProt: P01833)
S: 38 - 324 (UniProt: O33753)
PDB | External Database | Details |
---|---|---|
Arg 203 | - | linker |
Ile 204 | - | linker |
His 205 | - | linker |
Met 206 | - | linker |
Ser 207 | - | linker |
Ala 208 | - | linker |
Trp 209 | - | linker |
Ser 210 | - | linker |
His 211 | - | linker |
Pro 212 | - | linker |
Gln 213 | - | linker |
Phe 214 | - | linker |
Glu 215 | - | linker |
Lys 216 | - | linker |
Gly 217 | - | linker |
Gly 218 | - | linker |
Gly 219 | - | linker |
Ser 220 | - | linker |
Gly 221 | - | linker |
Gly 222 | - | linker |
Gly 223 | - | linker |
Ser 224 | - | linker |
Gly 225 | - | linker |
Gly 226 | - | linker |
Ser 227 | - | linker |
Ala 228 | - | linker |
Trp 229 | - | linker |
Ser 230 | - | linker |
His 231 | - | linker |
Pro 232 | - | linker |
Gln 233 | - | linker |
Phe 234 | - | linker |
Glu 235 | - | linker |
Lys 236 | - | linker |
Ile 237 | - | linker |
Asp 238 | - | linker |
Thr 239 | - | linker |
Thr 240 | - | linker |
J: -22 - 136 (UniProt: P01591)
PDB | External Database | Details |
---|---|---|
His 137 | - | expression tag |
His 138 | - | expression tag |
His 139 | - | expression tag |
His 140 | - | expression tag |
His 141 | - | expression tag |
His 142 | - | expression tag |
His 143 | - | expression tag |
His 144 | - | expression tag |
PDB | External Database | Details |
---|---|---|
His 548 | - | expression tag |
His 549 | - | expression tag |
His 550 | - | expression tag |
His 551 | - | expression tag |
His 552 | - | expression tag |
His 553 | - | expression tag |
His 554 | - | expression tag |
His 555 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 8 | - | initiating methionine |
Gly 9 | - | expression tag |
Ser 10 | - | expression tag |
His 11 | - | expression tag |
His 12 | - | expression tag |
His 13 | - | expression tag |
His 14 | - | expression tag |
His 15 | - | expression tag |
His 16 | - | expression tag |
His 17 | - | expression tag |
His 18 | - | expression tag |
Gly 19 | - | expression tag |
Ser 20 | - | expression tag |
Asp 21 | - | expression tag |
Tyr 22 | - | expression tag |
Asp 23 | - | expression tag |
Ile 24 | - | expression tag |
Pro 25 | - | expression tag |
Thr 26 | - | expression tag |
Thr 27 | - | expression tag |
Glu 28 | - | expression tag |
Asn 29 | - | expression tag |
Leu 30 | - | expression tag |
Tyr 31 | - | expression tag |
Phe 32 | - | expression tag |
Gln 33 | - | expression tag |
Gly 34 | - | expression tag |
Ser 35 | - | expression tag |
Glu 36 | - | expression tag |
Phe 37 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 244626.0 | |
All* | Total formula weight | 244626.0 |