6LJA
Crystal Structure of exoHep from Bacteroides intestinalis DSM 17393 complexed with disaccharide product
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Heparinase II/III-like protein | polymer | 876 | 100057.5 | 1 | UniProt (B3C5J6) Pfam (PF16332) Pfam (PF07940) | Bacteroides intestinalis DSM 17393 | |
| 2 | B (B) | 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose | branched | 577.5 | 1 | In PDB BIRD (PRD_900026) GlyTouCan (G01871HO) | HEPARIN DISACCHARIDE I-S, | ||
| 3 | C, D (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 4 | E (A) | water | water | 18.0 | 893 | Chemie (HOH) |
Sequence modifications
A: 1 - 868 (UniProt: B3C5J6)
| PDB | External Database | Details |
|---|---|---|
| Leu 869 | - | expression tag |
| Glu 870 | - | expression tag |
| His 871 | - | expression tag |
| His 872 | - | expression tag |
| His 873 | - | expression tag |
| His 874 | - | expression tag |
| His 875 | - | expression tag |
| His 876 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 100057.5 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 577.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 80.2 | |
| All* | Total formula weight | 100715.1 |
