6LJA
Crystal Structure of exoHep from Bacteroides intestinalis DSM 17393 complexed with disaccharide product
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.475, 108.333, 128.685 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.768 - 1.978 |
R-factor | 0.1482 |
Rwork | 0.146 |
R-free | 0.18510 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.052 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.770 | 2.049 |
High resolution limit [Å] | 1.978 | 1.978 |
Rmerge | 0.101 | 0.309 |
Rmeas | 0.110 | 0.110 |
Rpim | 0.043 | 0.133 |
Number of reflections | 58145 | 5338 |
<I/σ(I)> | 15.17 | |
Completeness [%] | 98.8 | |
Redundancy | 6.4 | |
CC(1/2) | 0.981 | 0.981 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 16% (w/v) PEG 1500, 0.1 M MMT (DL-malic acid, MES, and Tris), pH 6.0 |