6L8U
Crystal structure of human BCDIN3D in complex with SAH
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | RNA 5'-monophosphate methyltransferase | polymer | 284 | 32451.4 | 4 | UniProt (Q7Z5W3) Pfam (PF06859) | Homo sapiens (Human) | BCDIN3 domain-containing protein |
| 2 | E, F, G, H (A, B, C, D) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 4 | Chemie (SAH) PubChem (16760024) PubChem (193) PubChem (13792) PubChem (177678424) PubChem (189149) PubChem (439155) PubChem (25210495) PubChem (21125603) PubChem (44361184) PubChem (25203782) PubChem (46936206) PubChem (50989525) PubChem (51380914) PubChem (52224398) PubChem (57544532) PubChem (52224400) PubChem (59046843) PubChem (59170628) PubChem (59576228) PubChem (66805708) PubChem (5284331) PubChem (70689219) PubChem (70702054) PubChem (70832431) PubChem (71170554) PubChem (13231890) PubChem (6419189) PubChem (118374891) PubChem (118560068) PubChem (126969526) PubChem (129105892) PubChem (164157219) PubChem (143518505) PubChem (154578335) PubChem (163054214) PubChem (163335525) | |||
| 3 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 7 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 14 - 284 (UniProt: Q7Z5W3)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Gly -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Ser -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| His 1 | - | expression tag |
| His 2 | - | expression tag |
| Ser 3 | - | expression tag |
| Ser 4 | - | expression tag |
| Gly 5 | - | expression tag |
| Leu 6 | - | expression tag |
| Val 7 | - | expression tag |
| Pro 8 | - | expression tag |
| Arg 9 | - | expression tag |
| Gly 10 | - | expression tag |
| Ser 11 | - | expression tag |
| His 12 | - | expression tag |
| Met 13 | - | expression tag |
| - | Pro 92 | deletion |
| - | Asp 93 | deletion |
| - | Gly 94 | deletion |
| - | Glu 95 | deletion |
| - | Thr 96 | deletion |
| - | Cys 97 | deletion |
| - | Ser 98 | deletion |
| - | Asp 99 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 129805.5 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1537.6 | |
| All* | Total formula weight | 131343.1 |
