6KSF
Crystal Structure of ALKBH1 bound to 21-mer DNA bulge
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Alpha-ketoglutarate-dependent dioxygenase alkB homolog 1 | polymer | 336 | 38087.3 | 1 | Pfam (PF13532) UniProt (by SIFTS) (P0CB42) In PDB | Mus musculus (house mouse) | |
| 2 | B | DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DCP*DCP*DGP*DCP*DGP*DTP*DGP*DCP*DTP*DGP*DGP*DAP*DTP*DCP*DC)-3') | polymer | 24 | 7378.7 | 1 | Homo sapiens | ||
| 3 | C | DNA (5'-D(*DGP*DGP*DAP*DTP*DCP*DCP*DAP*DGP*DCP*DAP*DCP*DGP*DCP*DCP*DAP*DCP*DTP*DCP*DAP*DGP*DC)-3') | polymer | 21 | 6378.1 | 1 | Homo sapiens | ||
| 4 | A | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 5 | A | SUCCINIC ACID | non-polymer | 118.1 | 1 | Chemie (SIN) | |||
| 6 | B | propane-1-thiol | non-polymer | 76.2 | 1 | Chemie (XL3) | |||
| 7 | water | water | 18.0 | 63 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 51844.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 265.2 | |
| All* | Total formula weight | 52109.4 |
