6KM9
Crystal structure of SucA from Vibrio vulnificus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component | polymer | 886 | 99516.0 | 2 | UniProt (A0A3Q0L1E1) Pfam (PF00676) Pfam (PF02779) Pfam (PF16870) | Vibrio vulnificus (strain CMCP6) | |
| 2 | C, G (A, B) | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 2 | Chemie (P6G) | |||
| 3 | D, H (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | E, I (A, B) | THIAMINE DIPHOSPHATE | non-polymer | 425.3 | 2 | Chemie (TPP) | |||
| 5 | F (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 6 | J, K (A, B) | water | water | 18.0 | 139 | Chemie (HOH) |
Sequence modifications
A, B: 85 - 941 (UniProt: A0A3Q0L1E1)
| PDB | External Database | Details |
|---|---|---|
| Met 56 | - | initiating methionine |
| Gly 57 | - | expression tag |
| Ser 58 | - | expression tag |
| Ser 59 | - | expression tag |
| His 60 | - | expression tag |
| His 61 | - | expression tag |
| His 62 | - | expression tag |
| His 63 | - | expression tag |
| His 64 | - | expression tag |
| His 65 | - | expression tag |
| Asp 66 | - | expression tag |
| Tyr 67 | - | expression tag |
| Asp 68 | - | expression tag |
| Ile 69 | - | expression tag |
| Pro 70 | - | expression tag |
| Thr 71 | - | expression tag |
| Thr 72 | - | expression tag |
| Glu 73 | - | expression tag |
| Asn 74 | - | expression tag |
| Leu 75 | - | expression tag |
| Tyr 76 | - | expression tag |
| Phe 77 | - | expression tag |
| Gln 78 | - | expression tag |
| Gly 79 | - | expression tag |
| Gly 80 | - | expression tag |
| Gly 81 | - | expression tag |
| Gly 82 | - | expression tag |
| Gly 83 | - | expression tag |
| Gly 84 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 199032.0 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1504.0 | |
| All* | Total formula weight | 200536.0 |






