6KI3
The crystal structure of AsfvAP:dF commplex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Probable AP endonuclease | polymer | 301 | 33842.1 | 2 | UniProt (P0C9C6) Pfam (PF01261) In PDB | African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV) | APE |
2 | C, F | DNA (5'-D(*GP*CP*AP*GP*CP*GP*TP*CP*C)-3') | polymer | 9 | 2716.8 | 2 | African swine fever virus | ||
3 | D, G | DNA (5'-D(P*(3DR)P*CP*GP*AP*CP*GP*AP*G)-3') | polymer | 8 | 2327.5 | 2 | African swine fever virus | ||
4 | E, H | DNA (5'-D(*CP*CP*TP*CP*GP*TP*CP*GP*GP*GP*GP*AP*CP*GP*CP*TP*G)-3') | polymer | 17 | 5220.4 | 2 | African swine fever virus | ||
5 | A, B | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
6 | water | water | 18.0 | 89 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 296 (UniProt: P0C9C6)
PDB | External Database | Details |
---|---|---|
Gly -4 | - | expression tag |
Ser -3 | - | expression tag |
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 88213.5 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 392.5 | |
All* | Total formula weight | 88606.0 |