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6KI3

The crystal structure of AsfvAP:dF commplex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
A0004519molecular_functionendonuclease activity
A0004527molecular_functionexonuclease activity
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0008081molecular_functionphosphoric diester hydrolase activity
A0008270molecular_functionzinc ion binding
A0030430cellular_componenthost cell cytoplasm
A0042025cellular_componenthost cell nucleus
A0044423cellular_componentvirion component
A0046872molecular_functionmetal ion binding
B0003677molecular_functionDNA binding
B0003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
B0004519molecular_functionendonuclease activity
B0004527molecular_functionexonuclease activity
B0006281biological_processDNA repair
B0006284biological_processbase-excision repair
B0008081molecular_functionphosphoric diester hydrolase activity
B0008270molecular_functionzinc ion binding
B0030430cellular_componenthost cell cytoplasm
B0042025cellular_componenthost cell nucleus
B0044423cellular_componentvirion component
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue ZN A 301
ChainResidue
AHIS182
AASP231
AHIS233
CDC9
D3DR10

site_idAC2
Number of Residues6
Detailsbinding site for residue ZN A 302
ChainResidue
AZN303
D3DR10
AGLU142
AASP179
AHIS218
AGLU271

site_idAC3
Number of Residues5
Detailsbinding site for residue ZN A 303
ChainResidue
AHIS78
AHIS115
AGLU142
AZN302
D3DR10

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN B 301
ChainResidue
BHIS182
BASP231
BHIS233
G3DR10

site_idAC5
Number of Residues6
Detailsbinding site for residue ZN B 302
ChainResidue
BGLU142
BASP179
BHIS218
BGLU271
BZN303
G3DR10

site_idAC6
Number of Residues5
Detailsbinding site for residue ZN B 303
ChainResidue
BHIS78
BHIS115
BGLU142
BZN302
G3DR10

site_idAC7
Number of Residues23
Detailsbinding site for Di-nucleotide 3DR G 10 and DC G 11
ChainResidue
BPHE5
BPHE45
BPRO49
BARG50
BHIS78
BTYR81
BHIS115
BGLU142
BASP179
BHIS182
BASP231
BHIS233
BGLU271
BASN273
BZN301
BZN302
BZN303
BHOH406
FDC9
GDG12
GHOH103
HDC7
HDG8

Functional Information from PROSITE/UniProt
site_idPS00731
Number of Residues17
DetailsAP_NUCLEASE_F2_3 AP endonucleases family 2 signature 3. FHlNDAatecGsgiDrH
ChainResidueDetails
APHE217-HIS233

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:32194979
ChainResidueDetails
AHIS78
AHIS115
AGLU271
BHIS78
BHIS115
BGLU271

site_idSWS_FT_FI2
Number of Residues10
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00763, ECO:0000269|PubMed:32194979
ChainResidueDetails
AGLU142
BHIS233
AHIS182
AHIS218
AASP231
AHIS233
BGLU142
BHIS182
BHIS218
BASP231

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PDB entries from 2024-07-17

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