6KDR
Crystal structure of human NRMT2 in complex with human centromere protein B peptide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Alpha N-terminal protein methyltransferase 1B | polymer | 244 | 27519.5 | 2 | UniProt (Q5VVY1) Pfam (PF05891) In PDB | Homo sapiens (Human) | Methyltransferase-like protein 11B,X-Pro-Lys N-terminal protein methyltransferase 1B,NTM1B |
2 | D, E | Peptide from Major centromere autoantigen B | polymer | 9 | 1105.3 | 2 | UniProt (P07199) In PDB | Homo sapiens | Centromere protein B,CENP-B |
3 | A, B | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 2 | Chemie (SAH) | |||
4 | A, B | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
5 | A, B, E | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
6 | water | water | 18.0 | 246 | Chemie (HOH) |
Sequence modifications
A, B: 61 - 283 (UniProt: Q5VVY1)
PDB | External Database | Details |
---|---|---|
Met 40 | - | expression tag |
Gly 41 | - | expression tag |
Ser 42 | - | expression tag |
Ser 43 | - | expression tag |
His 44 | - | expression tag |
His 45 | - | expression tag |
His 46 | - | expression tag |
His 47 | - | expression tag |
His 48 | - | expression tag |
His 49 | - | expression tag |
Ser 50 | - | expression tag |
Ser 51 | - | expression tag |
Gly 52 | - | expression tag |
Leu 53 | - | expression tag |
Val 54 | - | expression tag |
Pro 55 | - | expression tag |
Arg 56 | - | expression tag |
Gly 57 | - | expression tag |
Ser 58 | - | expression tag |
His 59 | - | expression tag |
Met 60 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 57249.6 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1151.5 | |
All* | Total formula weight | 58401.0 |