6JYZ

Crystal structure of endogalactoceramidase

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	Putative secreted endoglycosylceramidase	polymer	476	51540.8	1	UniProt (A0A3S5Y3Q1) Pfam (PF00150) In PDB	Rhodococcus hoagii (strain 103S)
2	A	2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL	non-polymer		354.4	1	Chemie (PE4)
3	A	ISOPROPYL ALCOHOL	non-polymer		60.1	2	Chemie (IPA)
4	A	1,2-ETHANEDIOL	non-polymer		62.1	2	Chemie (EDO)
5		water	water		18.0	630	Chemie (HOH)

Sequence modifications

A: 34 - 488 (UniProt: A0A3S5Y3Q1)

PDB	External Database	Details
Met 13	-	initiating methionine
Gly 14	-	expression tag
Ser 15	-	expression tag
Ser 16	-	expression tag
His 17	-	expression tag
His 18	-	expression tag
His 19	-	expression tag
His 20	-	expression tag
His 21	-	expression tag
His 22	-	expression tag
Ser 23	-	expression tag
Ser 24	-	expression tag
Gly 25	-	expression tag
Leu 26	-	expression tag
Val 27	-	expression tag
Pro 28	-	expression tag
Arg 29	-	expression tag
Gly 30	-	expression tag
Ser 31	-	expression tag
His 32	-	expression tag
Met 33	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	51540.8
Non-Polymers*	Number of molecules	5
	Total formula weight	598.8
All*	Total formula weight	52139.5

*Water molecules are not included.