6JVX
Crystal structure of RBM38 in complex with RNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | RNA-binding protein 38 | polymer | 128 | 13853.5 | 1 | UniProt (Q9H0Z9) Pfam (PF00076) In PDB | Homo sapiens (Human) | CLL-associated antigen KW-5,HSRNASEB,RNA-binding motif protein 38,RNA-binding region-containing protein 1,ssDNA-binding protein SEB4 |
2 | B | RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*G)-3') | polymer | 12 | 3863.3 | 1 | Homo sapiens | ||
3 | A | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
4 | water | water | 18.0 | 127 | Chemie (HOH) |
Sequence modifications
A: 26 - 121 (UniProt: Q9H0Z9)
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
Gly -5 | - | expression tag |
Ser -4 | - | expression tag |
Ser -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
Ser 4 | - | expression tag |
Ser 5 | - | expression tag |
Gly 6 | - | expression tag |
Leu 7 | - | expression tag |
Val 8 | - | expression tag |
Pro 9 | - | expression tag |
Arg 10 | - | expression tag |
Gly 11 | - | expression tag |
Ser 12 | - | expression tag |
His 13 | - | expression tag |
Met 14 | - | expression tag |
Ala 15 | - | expression tag |
Ser 16 | - | expression tag |
Met 17 | - | expression tag |
Thr 18 | - | expression tag |
Gly 19 | - | expression tag |
Gly 20 | - | expression tag |
Gln 21 | - | expression tag |
Gln 22 | - | expression tag |
Met 23 | - | expression tag |
Gly 24 | - | expression tag |
Arg 25 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 17716.8 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 192.1 | |
All* | Total formula weight | 17908.9 |