6JTK
Crystal structure of NagZ from Neisseria gonorrhoeae in complex with N-trifluoroacetyl-D-glucosamine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Beta-hexosaminidase | polymer | 397 | 42905.9 | 6 | UniProt (Q5FA94) Pfam (PF00933) | Neisseria gonorrhoeae | Beta-N-acetylhexosaminidase,N-acetyl-beta-glucosaminidase |
| 2 | G, H, I, J (A, B, C, D) | 2,2,2-tris(fluoranyl)-N-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide | non-polymer | 275.2 | 4 | Chemie (C76) PubChem (16493921) PubChem (195233) PubChem (286287) PubChem (18477661) PubChem (26183448) PubChem (40463522) PubChem (40506513) PubChem (41374182) PubChem (41374186) PubChem (41374188) PubChem (40506514) PubChem (49802606) PubChem (58852884) PubChem (59080389) PubChem (59080402) PubChem (59080409) PubChem (59624125) PubChem (59881417) PubChem (2760700) PubChem (89355981) PubChem (6994941) PubChem (90057309) PubChem (71315521) PubChem (90352735) PubChem (90352754) PubChem (92252745) PubChem (90352712) PubChem (95162264) PubChem (92252744) PubChem (7171769) PubChem (117817335) PubChem (131705608) PubChem (133126504) PubChem (140458083) PubChem (154473373) PubChem (172641852) PubChem (162542954) PubChem (168362827) PubChem (168368328) PubChem (168370383) PubChem (168372099) PubChem (168372410) PubChem (168372820) PubChem (168374749) PubChem (168375647) | |||
| 3 | K, L, M, N, O... (A, B, C, D, E...) | water | water | 18.0 | 1051 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 361 (UniProt: Q5FA94)
| PDB | External Database | Details |
|---|---|---|
| Met -35 | - | expression tag |
| Gly -34 | - | expression tag |
| Ser -33 | - | expression tag |
| Ser -32 | - | expression tag |
| His -31 | - | expression tag |
| His -30 | - | expression tag |
| His -29 | - | expression tag |
| His -28 | - | expression tag |
| His -27 | - | expression tag |
| His -26 | - | expression tag |
| Ser -25 | - | expression tag |
| Ser -24 | - | expression tag |
| Gly -23 | - | expression tag |
| Leu -22 | - | expression tag |
| Val -21 | - | expression tag |
| Pro -20 | - | expression tag |
| Arg -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| His -16 | - | expression tag |
| Met -15 | - | expression tag |
| Ala -14 | - | expression tag |
| Ser -13 | - | expression tag |
| Met -12 | - | expression tag |
| Thr -11 | - | expression tag |
| Gly -10 | - | expression tag |
| Gly -9 | - | expression tag |
| Gln -8 | - | expression tag |
| Gln -7 | - | expression tag |
| Met -6 | - | expression tag |
| Gly -5 | - | expression tag |
| Arg -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Glu -1 | - | expression tag |
| Phe 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 257435.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1100.7 | |
| All* | Total formula weight | 258535.9 |
