6JO8
The complex structure of CHIKV envelope glycoprotein bound to human MXRA8
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Togavirin | polymer | 406 | 45882.1 | 3 | UniProt (C8YZ73) Pfam (PF01563) Pfam (PF00943) In PDB | Chikungunya virus (CHIKV) | CHIKV p62 |
2 | B, D, F | CHIKV E1 | polymer | 432 | 46030.8 | 3 | UniProt (A4L787) Pfam (PF01589) In PDB | Chikungunya virus (CHIKV) | |
3 | M, N, O | Matrix remodeling-associated protein 8 | polymer | 269 | 30148.7 | 3 | UniProt (Q9BRK3) Pfam (PF07686) In PDB | Homo sapiens (Human) | MXRA8, Limitrin |
4 | G, H, I | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G07375KG) | |||
5 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
A, C, E: 1 - 405 (UniProt: C8YZ73)
B, D, F: 1 - 412 (UniProt: A4L787)
M, N, O: 25 - 292 (UniProt: Q9BRK3)
PDB | External Database | Details |
---|---|---|
Met 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -19 | - | expression tag |
Gly -18 | - | expression tag |
Gly -17 | - | expression tag |
Gly -16 | - | expression tag |
Ser -15 | - | expression tag |
Gly -14 | - | expression tag |
Gly -13 | - | expression tag |
Gly -12 | - | expression tag |
Gly -11 | - | expression tag |
Ser -10 | - | expression tag |
Gly -9 | - | expression tag |
Gly -8 | - | expression tag |
Gly -7 | - | expression tag |
Gly -6 | - | expression tag |
Ser -5 | - | expression tag |
Gly -4 | - | expression tag |
Gly -3 | - | expression tag |
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 24 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 366184.7 | |
Branched | Number of molecules | 3 |
Total formula weight | 1273.2 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 221.2 | |
All* | Total formula weight | 367679.1 |