6JO0
Crystal structure of the DTS-motif rhodopsin from Phaeocystis globosa virus 12T
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | VirRDTS | polymer | 232 | 28087.3 | 1 | UniProt (G8DI69) Pfam (PF01036) | Phaeocystis globosa virus 12T | |
| 2 | B (A) | RETINAL | non-polymer | 284.4 | 1 | Chemie (RET) | |||
| 3 | C, D, E, F, G... (A) | N-OCTANE | non-polymer | 114.2 | 6 | Chemie (OCT) | |||
| 4 | I (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 5 | J, K, L, M, N (A) | HEXANE | non-polymer | 86.2 | 5 | Chemie (HEX) | |||
| 6 | O (A) | DECANE | non-polymer | 142.3 | 1 | Chemie (D10) | |||
| 7 | P (A) | DODECANE | non-polymer | 170.3 | 1 | Chemie (D12) | |||
| 8 | Q, R, S (A) | nonane | non-polymer | 128.3 | 3 | Chemie (DD9) | |||
| 9 | T (A) | (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 1 | Chemie (OLB) | |||
| 10 | U (A) | water | water | 18.0 | 92 | Chemie (HOH) |
Sequence modifications
A: 1 - 225 (UniProt: G8DI69)
| PDB | External Database | Details |
|---|---|---|
| Gly -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Ser -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 28087.3 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 2549.6 | |
| All* | Total formula weight | 30636.8 |
