6JE4
Crystal structure of Nme1Cas9-sgRNA-dsDNA dimer mediated by double protein inhibitor AcrIIC3 monomers
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E, K, O | CRISPR-associated endonuclease Cas9 | polymer | 1083 | 124589.9 | 4 | UniProt (C9X1G5) Pfam (PF13395) Pfam (PF18541) In PDB | Neisseria meningitidis 8013 | |
2 | C, G, M, Q | target DNA strand | polymer | 35 | 10836.0 | 4 | synthetic construct | ||
3 | D, H, N, R | non-target DNA strand | polymer | 35 | 10858.0 | 4 | synthetic construct | ||
4 | B, F, L, P | sgRNA | polymer | 135 | 43059.4 | 4 | synthetic construct | ||
5 | I, J, S, T | AcrIIC3 | polymer | 117 | 13457.4 | 4 | UniProt (A0A3E2QDI5) UniProt (by SIFTS) (A0A425B395) In PDB | Neisseria meningitidis 8013 | |
6 | F, J, K, L, O... | 1,2-ETHANEDIOL | non-polymer | 62.1 | 18 | Chemie (EDO) | |||
7 | F, K, B | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
8 | water | water | 18.0 | 63 | Chemie (HOH) |
Sequence modifications
A, E, K, O: 1 - 1082 (UniProt: C9X1G5)
I, J, S, T: 1 - 116 (UniProt: A0A3E2QDI5)
PDB | External Database | Details |
---|---|---|
Ser 0 | - | expression tag |
Ala 16 | Asp 16 | engineered mutation |
Ala 588 | His 588 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 20 |
Total formula weight | 811202.8 | |
Non-Polymers* | Number of molecules | 21 |
Total formula weight | 1435.6 | |
All* | Total formula weight | 812638.4 |