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6J2Q

Yeast proteasome in Ub-accepted state (C1-b)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, H
(1, b)
Proteasome subunit beta type-1polymer21523573.62UniProt (P38624)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PRE3,Multicatalytic endopeptidase complex subunit PRE3,Proteasome component PRE3,Proteinase YSCE subunit PRE3
2B, I
(2, i)
Proteasome subunit beta type-2polymer26128299.92UniProt (P25043)
Pfam (PF00227)
Pfam (PF12465)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PUP1,Multicatalytic endopeptidase complex subunit PUP1,Proteasome component PUP1,Proteinase YSCE subunit PUP1
3C, J
(3, h)
Proteasome subunit beta type-3polymer20522627.82UniProt (P25451)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PUP3,Multicatalytic endopeptidase complex subunit PUP3,Proteasome component PUP3
4D, K
(4, g)
Proteasome subunit beta type-4polymer19822545.72UniProt (P22141)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit C11,Multicatalytic endopeptidase complex subunit C11,Proteasome component C11,Proteinase YSCE subunit 11
5E, L
(5, f)
Proteasome subunit beta type-5polymer28731670.52UniProt (P30656)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PRE2,Multicatalytic endopeptidase complex subunit PRE2,Proteasome component PRE2,Proteinase YSCE subunit PRE2
6F, M
(6, e)
Proteasome subunit beta type-6polymer24126905.12UniProt (P23724)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Multicatalytic endopeptidase complex subunit C5,Proteasome component C5
7G, N
(7, a)
Proteasome subunit beta type-7polymer26629471.32UniProt (P30657)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PRE4,Multicatalytic endopeptidase complex subunit PRE4,Proteasome component PRE4,Proteinase YSCE subunit PRE4
8O, V
(A, c)
Proteasome subunit alpha type-1polymer25228033.82UniProt (P21243)
Pfam (PF00227)
Pfam (PF10584)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit C7-alpha,Multicatalytic endopeptidase complex C7,Proteasome component C7-alpha,Proteasome component Y8,Proteinase YSCE subunit 7,SCL1 suppressor protein
9P, W
(B, j)
Proteasome subunit alpha type-2polymer25027191.82UniProt (P23639)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit Y7,Multicatalytic endopeptidase complex subunit Y7,Proteasome component Y7,Proteinase YSCE subunit 7
10Q, X
(C, d)
Proteasome subunit alpha type-3polymer25828748.22UniProt (P23638)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit Y13,Multicatalytic endopeptidase complex subunit Y13,Proteasome component Y13,Proteinase YSCE subunit 13
11R, Y
(D, n)
Proteasome subunit alpha type-4polymer25428478.12UniProt (P40303)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PRE6,Multicatalytic endopeptidase complex subunit PRE6,Proteasome component PRE6,Proteinase YSCE subunit PRE6
12S, Z
(E, m)
Proteasome subunit alpha type-5polymer26028649.12UniProt (P32379)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PUP2,Multicatalytic endopeptidase complex subunit PUP2,Proteasome component PUP2,Proteinase YSCE subunit PUP2
13AA, T
(F, l)
Proteasome subunit alpha type-6polymer23425634.02UniProt (P40302)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit PRE5,Multicatalytic endopeptidase complex subunit PRE5,Proteasome component PRE5,Proteinase YSCE subunit PRE5
14BA, U
(G, k)
Probable proteasome subunit alpha type-7polymer28831575.12UniProt (P21242)
Pfam (PF10584)
Pfam (PF00227)
Saccharomyces cerevisiae S288c (Baker's yeast)Macropain subunit C1,Multicatalytic endopeptidase complex subunit C1,Proteasome component C1,Proteinase YSCE subunit 1
15CA
(H)
26S protease regulatory subunit 7 homologpolymer46752054.91UniProt (P33299)
Pfam (PF21236)
Pfam (PF00004)
Pfam (PF17862)
Saccharomyces cerevisiae S288c (Baker's yeast)Protein CIM5,Tat-binding homolog 3
16DA
(I)
26S protease regulatory subunit 4 homologpolymer43748898.21UniProt (P40327)
Pfam (PF16450)
Pfam (PF00004)
Pfam (PF17862)
Saccharomyces cerevisiae S288c (Baker's yeast)Tat-binding homolog 5
17EA
(J)
26S protease regulatory subunit 8 homologpolymer40545342.71UniProt (Q01939)
Pfam (PF16450)
Pfam (PF00004)
Pfam (PF17862)
Saccharomyces cerevisiae S288c (Baker's yeast)Protein CIM3,Protein SUG1,Tat-binding protein TBY1
18FA
(K)
26S protease regulatory subunit 6B homologpolymer42847953.71UniProt (P33298)
Pfam (PF16450)
Pfam (PF00004)
Saccharomyces cerevisiae S288c (Baker's yeast)Protein YNT1,Tat-binding homolog 2
19GA
(L)
26S protease subunit RPT4polymer43749480.11UniProt (P53549)
Pfam (PF16450)
Pfam (PF00004)
Pfam (PF17862)
Saccharomyces cerevisiae S288c (Baker's yeast)26S protease subunit SUG2,Proteasomal cap subunit
20HA
(M)
26S protease regulatory subunit 6Apolymer43448315.71UniProt (P33297)
Pfam (PF16450)
Pfam (PF00004)
Pfam (PF17862)
Saccharomyces cerevisiae S288c (Baker's yeast)Tat-binding protein homolog 1,TBP-1
21IA
(N)
26S proteasome regulatory subunit RPN2polymer945104351.91UniProt (P32565)
Pfam (PF21505)
Pfam (PF01851)
Pfam (PF13646)
Pfam (PF18004)
Saccharomyces cerevisiae S288c (Baker's yeast)
22JA
(O)
26S proteasome regulatory subunit RPN9polymer39345839.31UniProt (Q04062)
Pfam (PF22037)
Pfam (PF01399)
Pfam (PF18261)
Saccharomyces cerevisiae S288c (Baker's yeast)Proteasome non-ATPase subunit 7
23KA
(P)
26S proteasome regulatory subunit RPN5polymer44551840.41UniProt (Q12250)
Pfam (PF22241)
Pfam (PF01399)
Pfam (PF18098)
Saccharomyces cerevisiae S288c (Baker's yeast)Proteasome non-ATPase subunit 5
24LA
(Q)
26S proteasome regulatory subunit RPN6polymer43449839.81UniProt (Q12377)
Pfam (PF18055)
Pfam (PF01399)
Pfam (PF18503)
Saccharomyces cerevisiae S288c (Baker's yeast)Proteasome non-ATPase subunit 4
25MA
(R)
26S proteasome regulatory subunit RPN7polymer42949016.41UniProt (Q06103)
Pfam (PF10602)
Pfam (PF01399)
Pfam (PF21154)
Saccharomyces cerevisiae S288c (Baker's yeast)
26NA
(S)
26S proteasome regulatory subunit RPN3polymer52360464.61UniProt (P40016)
Pfam (PF01399)
Pfam (PF08375)
Saccharomyces cerevisiae S288c (Baker's yeast)
27OA
(T)
26S proteasome regulatory subunit RPN12polymer27431952.11UniProt (P32496)
Pfam (PF10075)
Saccharomyces cerevisiae S288c (Baker's yeast)Nuclear integrity protein 1
28PA
(U)
26S proteasome regulatory subunit RPN8polymer33838365.51UniProt (Q08723)
Pfam (PF01398)
Pfam (PF13012)
Saccharomyces cerevisiae S288c (Baker's yeast)
29QA
(V)
Ubiquitin carboxyl-terminal hydrolase RPN11polymer30634442.31UniProt (P43588)
Pfam (PF01398)
Saccharomyces cerevisiae S288c (Baker's yeast)26S proteasome regulatory subunit RPN11,Protein MPR1
30RA
(W)
26S proteasome regulatory subunit RPN10polymer26829776.11UniProt (P38886)
Pfam (PF13519)
Saccharomyces cerevisiae S288c (Baker's yeast)
31SA
(X)
26S proteasome regulatory subunit RPN13polymer15617919.01UniProt (O13563)
Pfam (PF04683)
Saccharomyces cerevisiae S288c (Baker's yeast)Proteasome non-ATPase subunit 13
32TA
(Y)
26S proteasome complex subunit SEM1polymer8910397.11UniProt (O94742)
Pfam (PF05160)
Saccharomyces cerevisiae S288c (Baker's yeast)
33UA
(Z)
26S proteasome regulatory subunit RPN1polymer993109601.91UniProt (P38764)
Pfam (PF17781)
Pfam (PF01851)
Pfam (PF18051)
Saccharomyces cerevisiae S288c (Baker's yeast)HMG-CoA reductase degradation protein 2,Proteasome non-ATPase subunit 1
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains47
Total formula weight1692659.9
All*Total formula weight1692659.9
*Water molecules are not included.

237423

PDB entries from 2025-06-11

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