6IUD

Structure of Helicobacter pylori Soj-ADP complex bound to DNA

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D	SpoOJ regulator (Soj)	polymer	276	30608.5	4	UniProt (O25759) Pfam (PF01656) In PDB	Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
2	E	DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3')	polymer	24	7256.7	1		synthetic construct
3	F	DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3')	polymer	24	7483.8	1		synthetic construct
4	A, B, C, D	ADENOSINE-5'-DIPHOSPHATE	non-polymer		427.2	4	Chemie (ADP)
5	A, B, C, D	MAGNESIUM ION	non-polymer		24.3	4	Chemie (MG)

Sequence modifications

A, B, C, D: 1 - 264 (UniProt: O25759)

PDB	External Database	Details
Met -11	-	initiating methionine
Arg -10	-	expression tag
Gly -9	-	expression tag
Ser -8	-	expression tag
His -7	-	expression tag
His -6	-	expression tag
His -5	-	expression tag
His -4	-	expression tag
His -3	-	expression tag
His -2	-	expression tag
Gly -1	-	expression tag
Ser 0	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	137174.6
Non-Polymers*	Number of molecules	8
	Total formula weight	1806.0
All*	Total formula weight	138980.6

*Water molecules are not included.