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6IPU

Human nucleosome core particle containing 145 bp of DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Histone H3.1polymer9811504.52UniProt (P68431)
Pfam (PF00125)
Homo sapiens (Human)Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
2B
(B)
Histone H4polymer829279.91UniProt (P62805)
Pfam (PF15511)
Homo sapiens (Human)
3C, G
(C, G)
Histone H2A type 1-B/Epolymer10711766.82UniProt (P04908)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (Human)Histone H2A.2,Histone H2A/a,Histone H2A/m
4D, H
(D, H)
Histone H2B type 1-Jpolymer9510621.22UniProt (P06899)
Pfam (PF00125)
Homo sapiens (Human)Histone H2B.1,Histone H2B.r,H2B/r
5F
(F)
Histone H4polymer879990.81UniProt (P62805)
Pfam (PF15511)
Homo sapiens (Human)
6I
(I)
DNA (145-MER)polymer14544749.71Homo sapiens (Human)
7J
(J)
DNA (145-MER)polymer14544740.61Homo sapiens (Human)
8K, M
(C, G)
CHLORIDE IONnon-polymer35.52Chemie (CL)
9L, N, O, P, Q
(D, I, J)
MANGANESE (II) IONnon-polymer54.95Chemie (MN)
10AA, R, S, T, U...
(J, A, B, C, D...)
waterwater18.0114Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight176545.9
Non-Polymers*Number of molecules7
Total formula weight345.6
All*Total formula weight176891.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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