6IPU
Human nucleosome core particle containing 145 bp of DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 98.15 |
Detector technology | PIXEL |
Collection date | 2017-09-18 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 107.560, 109.710, 183.480 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 94.160 - 1.990 |
R-factor | 0.237 |
Rwork | 0.236 |
R-free | 0.26300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nzd |
RMSD bond length | 0.008 |
RMSD bond angle | 1.474 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 94.160 | 2.100 |
High resolution limit [Å] | 1.990 | 1.990 |
Rpim | 0.021 | 0.652 |
Number of reflections | 148453 | 21030 |
<I/σ(I)> | 17.4 | 1.3 |
Completeness [%] | 99.6 | 97.9 |
Redundancy | 12.2 | 11.6 |
CC(1/2) | 0.997 | 0.526 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291.15 | manganese chloride, potassium chloride, potassium cacodylate |