6I8B
Crystal structure of Spindlin1 in complex with the inhibitor VinSpinIn
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (B, E) | Spindlin-1 | polymer | 222 | 25499.8 | 2 | UniProt (Q9Y657) Pfam (PF02513) | Homo sapiens (Human) | Ovarian cancer-related protein,Spindlin1 |
| 2 | C, J (B, E) | 2-[4-[2-[[2-[3-[2-azanyl-5-(cyclopropylmethoxy)-3,3-dimethyl-indol-6-yl]oxypropyl]-1,3-dihydroisoindol-5-yl]oxy]ethyl]-1,2,3-triazol-1-yl]-1-[4-(2-pyrrolidin-1-ylethyl)piperidin-1-yl]ethanone | non-polymer | 739.0 | 2 | Chemie (H7T) | |||
| 3 | D, E, F, G, K (B, E) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 5 | Chemie (DMS) | |||
| 4 | H, L (B, E) | GLYCINE | non-polymer | 75.1 | 2 | Chemie (GLY) | |||
| 5 | I (E) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 6 | M, N (B, E) | water | water | 18.0 | 101 | Chemie (HOH) |
Sequence modifications
B, E: 49 - 262 (UniProt: Q9Y657)
| PDB | External Database | Details |
|---|---|---|
| Met 48 | - | initiating methionine |
| Ala 263 | - | expression tag |
| Glu 264 | - | expression tag |
| Asn 265 | - | expression tag |
| Leu 266 | - | expression tag |
| Tyr 267 | - | expression tag |
| Phe 268 | - | expression tag |
| Gln 269 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 50999.6 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 2113.7 | |
| All* | Total formula weight | 53113.3 |
