Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | AA | 16S ribosomal RNA | polymer | 1533 | 497075.8 | 1 | GenBank (1370526461) | Escherichia coli | |
2 | BA | 16S ribosomal RNA | polymer | 1533 | 496892.4 | 1 | GenBank (1370526449) | Escherichia coli | |
3 | DA | 23S ribosomal RNA | polymer | 2903 | 941505.4 | 1 | GenBank (1109114233) | Escherichia coli | |
4 | CA | 23S ribsomal RNA | polymer | 2904 | 941612.4 | 1 | GenBank (1109114233) | Escherichia coli | |
5 | DB, CB | 5S ribosomal RNA | polymer | 119 | 38483.9 | 2 | GenBank (1435226024) | Escherichia coli | |
6 | AB, BB | 30S ribosomal protein S2 | polymer | 218 | 24253.9 | 2 | UniProt (P0A7V0) Pfam (PF00318) In PDB | Escherichia coli | Small ribosomal subunit protein uS2 |
7 | AC, BC | 30S ribosomal protein S3 | polymer | 206 | 23078.8 | 2 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) In PDB | Escherichia coli | Small ribosomal subunit protein uS3 |
8 | AD, BD | 30S ribosomal protein S4 | polymer | 205 | 23383.0 | 2 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) In PDB | Escherichia coli | Small ribosomal subunit protein uS4 |
9 | AE, BE | 30S ribosomal protein S5 | polymer | 150 | 15804.3 | 2 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) In PDB | Escherichia coli | Small ribosomal subunit protein uS5 |
10 | AF, BF | 30S ribosomal protein S6 | polymer | 100 | 11669.4 | 2 | UniProt (P02358) Pfam (PF01250) In PDB | Escherichia coli | Small ribosomal subunit protein bS6 |
11 | AG, BG | 30S ribosomal protein S7 | polymer | 151 | 16861.5 | 2 | UniProt (P02359) Pfam (PF00177) In PDB | Escherichia coli | Small ribosomal subunit protein uS7 |
12 | AH, BH | 30S ribosomal protein S8 | polymer | 129 | 14015.4 | 2 | UniProt (P0A7W7) Pfam (PF00410) In PDB | Escherichia coli | Small ribosomal subunit protein uS8 |
13 | AI, BI | 30S ribosomal protein S9 | polymer | 127 | 14554.9 | 2 | UniProt (P0A7X3) Pfam (PF00380) In PDB | Escherichia coli | Small ribosomal subunit protein uS9 |
14 | AJ, BJ | 30S ribosomal protein S10 | polymer | 98 | 11197.0 | 2 | UniProt (P0A7R5) Pfam (PF00338) In PDB | Escherichia coli | Small ribosomal subunit protein uS10 |
15 | AK, BK | 30S ribosomal protein S11 | polymer | 117 | 12487.2 | 2 | UniProt (P0A7R9) Pfam (PF00411) In PDB | Escherichia coli | Small ribosomal subunit protein uS11 |
16 | AL | 30S ribosomal protein S12 | polymer | 123 | 13683.1 | 1 | UniProt (P0A7S3) Pfam (PF00164) In PDB | Escherichia coli | Small ribosomal subunit protein uS12 |
17 | AM, BM | 30S ribosomal protein S13 | polymer | 114 | 12625.8 | 2 | UniProt (P0A7S9) Pfam (PF00416) In PDB | Escherichia coli | Small ribosomal subunit protein uS13 |
18 | AN, BN | 30S ribosomal protein S14 | polymer | 100 | 11475.4 | 2 | UniProt (P0AG59) Pfam (PF00253) In PDB | Escherichia coli | Small ribosomal subunit protein uS14 |
19 | AO, BO | 30S ribosomal protein S15 | polymer | 88 | 10188.7 | 2 | UniProt (C3SSQ8) Pfam (PF00312) In PDB | Escherichia coli | |
20 | AP, BP | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 2 | UniProt (P0A7T3) Pfam (PF00886) In PDB | Escherichia coli | Small ribosomal subunit protein bS16 |
21 | AQ, BQ | 30S ribosomal protein S17 | polymer | 80 | 9263.9 | 2 | UniProt (P0AG63) Pfam (PF00366) In PDB | Escherichia coli | Small ribosomal subunit protein uS17 |
22 | AR, BR | 30S ribosomal protein S18 | polymer | 55 | 6466.5 | 2 | UniProt (P0A7T7) Pfam (PF01084) In PDB | Escherichia coli | Small ribosomal subunit protein bS18 |
23 | AS, BS | 30S ribosomal protein S19 | polymer | 79 | 9057.6 | 2 | UniProt (P0A7U3) Pfam (PF00203) In PDB | Escherichia coli | Small ribosomal subunit protein uS19 |
24 | AT, BT | 30S ribosomal protein S20 | polymer | 85 | 9506.2 | 2 | UniProt (P0A7U7) Pfam (PF01649) In PDB | Escherichia coli | Small ribosomal subunit protein bS20 |
25 | AU, BU | 30S ribosomal protein S21 | polymer | 54 | 6433.5 | 2 | UniProt (P68679) Pfam (PF01165) In PDB | Escherichia coli | Small ribosomal subunit protein bS21 |
26 | BL | 30S ribosomal protein S12 | polymer | 123 | 13637.0 | 1 | UniProt (P0A7S3) Pfam (PF00164) In PDB | Escherichia coli | Small ribosomal subunit protein uS12 |
27 | CC, DC | 50S ribosomal protein L2 | polymer | 271 | 29663.2 | 2 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) In PDB | Escherichia coli | Large ribosomal subunit protein uL2 |
28 | CD | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) In PDB | Escherichia coli | Large ribosomal subunit protein uL3 |
29 | CE, DE | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 2 | UniProt (P60723) Pfam (PF00573) In PDB | Escherichia coli | Large ribosomal subunit protein uL4 |
30 | CF, DF | 50S ribosomal protein L5 | polymer | 177 | 20073.2 | 2 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) In PDB | Escherichia coli | Large ribosomal subunit protein uL5 |
31 | CG, DG | 50S ribosomal protein L6 | polymer | 176 | 18801.6 | 2 | UniProt (P0AG55) Pfam (PF00347) In PDB | Escherichia coli | Large ribosomal subunit protein uL6 |
32 | CH, DH | 50S ribosomal protein L9 | polymer | 148 | 15674.9 | 2 | UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) In PDB | Escherichia coli | Large ribosomal subunit protein bL9 |
33 | CJ, DJ | 50S ribosomal protein L11 | polymer | 141 | 14763.2 | 2 | UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) In PDB | Escherichia coli | Large ribosomal subunit protein uL11 |
34 | CK, DK | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 2 | UniProt (P0AA10) Pfam (PF00572) In PDB | Escherichia coli | Large ribosomal subunit protein uL13 |
35 | CL, DL | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 2 | UniProt (P0ADY3) Pfam (PF00238) In PDB | Escherichia coli | Large ribosomal subunit protein uL14 |
36 | CM, DM | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 2 | UniProt (P02413) Pfam (PF00828) In PDB | Escherichia coli | Large ribosomal subunit protein uL15 |
37 | CN, DN | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 2 | UniProt (P0ADY7) Pfam (PF00252) In PDB | Escherichia coli | Large ribosomal subunit protein uL16 |
38 | CO, DO | 50S ribosomal protein L17 | polymer | 120 | 13721.9 | 2 | UniProt (P0AG44) Pfam (PF01196) In PDB | Escherichia coli | Large ribosomal subunit protein bL17 |
39 | CP, DP | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 2 | UniProt (P0C018) Pfam (PF00861) In PDB | Escherichia coli | Large ribosomal subunit protein uL18 |
40 | CQ, DQ | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 2 | UniProt (P0A7K6) Pfam (PF01245) In PDB | Escherichia coli | Large ribosomal subunit protein bL19 |
41 | CR, DR | 50S ribosomal protein L20 | polymer | 117 | 13396.8 | 2 | UniProt (P0A7L3) Pfam (PF00453) In PDB | Escherichia coli | Large ribosomal subunit protein bL20 |
42 | CS, DS | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 2 | UniProt (P0AG48) Pfam (PF00829) In PDB | Escherichia coli | Large ribosomal subunit protein bL21 |
43 | CT, DT | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 2 | UniProt (P61175) Pfam (PF00237) In PDB | Escherichia coli | Large ribosomal subunit protein uL22 |
44 | CU, DU | 50S ribosomal protein L23 | polymer | 93 | 10546.5 | 2 | UniProt (P0ADZ0) Pfam (PF00276) In PDB | Escherichia coli | Large ribosomal subunit protein uL23 |
45 | CV, DV | 50S ribosomal protein L24 | polymer | 102 | 11078.9 | 2 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) In PDB | Escherichia coli | Large ribosomal subunit protein uL24 |
46 | CW, DW | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 2 | UniProt (P68919) Pfam (PF01386) In PDB | Escherichia coli | Large ribosomal subunit protein bL25 |
47 | CX, DX | 50S ribosomal protein L27 | polymer | 76 | 8275.5 | 2 | UniProt (P0A7L8) Pfam (PF01016) In PDB | Escherichia coli | Large ribosomal subunit protein bL27 |
48 | CY, DY | 50S ribosomal protein L28 | polymer | 77 | 8896.4 | 2 | UniProt (P0A7M2) Pfam (PF00830) In PDB | Escherichia coli | Large ribosomal subunit protein bL28 |
49 | CZ, DZ | 50S ribosomal protein L29 | polymer | 62 | 7155.3 | 2 | UniProt (P0A7M6) Pfam (PF00831) In PDB | Escherichia coli | Large ribosomal subunit protein uL29 |
50 | C0, D0 | 50S ribosomal protein L30 | polymer | 58 | 6423.6 | 2 | UniProt (P0AG51) Pfam (PF00327) In PDB | Escherichia coli | Large ribosomal subunit protein uL30 |
51 | C1, D1 | 50S ribosomal protein L32 | polymer | 56 | 6332.2 | 2 | UniProt (P0A7N4) Pfam (PF01783) In PDB | Escherichia coli | Large ribosomal subunit protein bL32 |
52 | C2, D2 | 50S ribosomal protein L33 | polymer | 51 | 5885.9 | 2 | UniProt (P0A7N9) Pfam (PF00471) In PDB | Escherichia coli | Large ribosomal subunit protein bL33 |
53 | C3, D3 | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 2 | UniProt (P0A7P5) Pfam (PF00468) In PDB | Escherichia coli | Large ribosomal subunit protein bL34 |
54 | C4, D4 | 50S ribosomal protein L35 | polymer | 64 | 7181.8 | 2 | UniProt (P0A7Q1) Pfam (PF01632) In PDB | Escherichia coli | Large ribosomal subunit protein bL35,Ribosomal protein A |
55 | C5, D5 | 50S ribosomal protein L36 2 | polymer | 45 | 5326.5 | 2 | UniProt (Q2EEQ2) Pfam (PF00444) In PDB | Escherichia coli | Large ribosomal subunit protein bL36-B |
56 | DD | 50S ribosomal protein L3 | polymer | 209 | 22291.6 | 1 | UniProt (P60438) Pfam (PF00297) In PDB | Escherichia coli | Large ribosomal subunit protein uL3 |
57 | D7 | 50S ribosomal protein L31 type B | polymer | 68 | 7778.7 | 1 | UniProt (P0A7N1) Pfam (PF01197) In PDB | Escherichia coli | Large ribosomal subunit protein bL31-B |
58 | AA, BA, DA, CA, DM... | MAGNESIUM ION | non-polymer | 24.3 | 453 | Chemie (MG) | |||
59 | DS, AA, DA, DT, DU... | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 8 | Chemie (PGE) | |||
60 | DK, DN, DA, DT, AA... | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 13 | Chemie (MPD) | |||
61 | DA, DQ, DR, DS, BA | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 5 | Chemie (PG4) | |||
62 | DA | SPERMIDINE | non-polymer | 145.2 | 3 | Chemie (SPD) | |||
63 | DM, DP, DA, D5 | 1,4-DIAMINOBUTANE | non-polymer | 88.2 | 7 | Chemie (PUT) | |||
64 | DA | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 2 | Chemie (1PE) | |||
65 | DA | ACETIC ACID | non-polymer | 60.1 | 3 | Chemie (ACY) | |||
66 | DA, DP, DQ, D1, D3 | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 9 | Chemie (PEG) | |||
67 | DA, DB, DR, D1 | 1,2-ETHANEDIOL | non-polymer | 62.1 | 12 | Chemie (EDO) | |||
68 | DA | GUANINE | non-polymer | 151.1 | 1 | Chemie (GUN) | |||
69 | water | water | 18.0 | 6550 | Chemie (HOH) |
Sequence modifications
CH, DH: 1 - 148 (UniProt: P0A7R1)
C2, D2: 3 - 52 (UniProt: P0A7N9)
PDB | External Database | Details |
---|---|---|
- | Leu 122 | deletion |
Gln 148 | Glu 149 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 53 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 105 |
Total formula weight | 4238840.2 | |
Non-Polymers* | Number of molecules | 516 |
Total formula weight | 18279.5 | |
All* | Total formula weight | 4257119.7 |