6HZY
Crystal structure of a bacterial fucosidase with inhibitor FucPUG
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Alpha-L-fucosidase | polymer | 475 | 54830.0 | 2 | UniProt (Q8A3I4) Pfam (PF01120) | Bacteroides thetaiotaomicron VPI-5482 | |
| 2 | C, D, E, F, G... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 17 | Chemie (EDO) | |||
| 3 | N, Y (A, B) | [(~{Z})-[(3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-ylidene]amino] ~{N}-phenylcarbamate | non-polymer | 296.3 | 2 | Chemie (GYZ) | |||
| 4 | AA, BA, O, P, Q... (B, A) | SULFATE ION | non-polymer | 96.1 | 7 | Chemie (SO4) | |||
| 5 | CA, DA (A, B) | water | water | 18.0 | 762 | Chemie (HOH) |
Sequence modifications
A, B: 31 - 484 (UniProt: Q8A3I4)
| PDB | External Database | Details |
|---|---|---|
| Met 10 | - | initiating methionine |
| Gly 11 | - | expression tag |
| Ser 12 | - | expression tag |
| His 13 | - | expression tag |
| His 14 | - | expression tag |
| His 15 | - | expression tag |
| His 16 | - | expression tag |
| His 17 | - | expression tag |
| His 18 | - | expression tag |
| Ser 19 | - | expression tag |
| Ser 20 | - | expression tag |
| Gly 21 | - | expression tag |
| Leu 22 | - | expression tag |
| Glu 23 | - | expression tag |
| Val 24 | - | expression tag |
| Leu 25 | - | expression tag |
| Phe 26 | - | expression tag |
| Gln 27 | - | expression tag |
| Gly 28 | - | expression tag |
| Pro 29 | - | expression tag |
| Ala 30 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 109660.0 | |
| Non-Polymers* | Number of molecules | 26 |
| Total formula weight | 2320.1 | |
| All* | Total formula weight | 111980.1 |
