6HLX
Structure of the PBP AgaA in complex with agropinic acid from A.tumefacien R10
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | AgaA | polymer | 492 | 54459.3 | 1 | UniProt (O50260) Pfam (PF00496) | Rhizobium radiobacter (Agrobacterium tumefaciens) | Peptide ABC transporter substrate-binding protein,Peptide/nickel transport system substrate-binding protein |
| 2 | B, C, D (A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 3 | E (A) | agropinic acid | non-polymer | 291.3 | 1 | Chemie (G9Z) | |||
| 4 | F (A) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
| 5 | G, H, I, J, K... (A) | ACETATE ION | non-polymer | 59.0 | 7 | Chemie (ACT) | |||
| 6 | N, O, P, Q, R... (A) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
| 7 | T, U, V, W (A) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 8 | AA, BA, CA, DA, EA... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 14 | Chemie (EDO) | |||
| 9 | LA (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 10 | MA (A) | water | water | 18.0 | 470 | Chemie (HOH) |
Sequence modifications
A: 25 - 509 (UniProt: O50260)
| PDB | External Database | Details |
|---|---|---|
| Met 24 | - | initiating methionine |
| His 510 | - | expression tag |
| His 511 | - | expression tag |
| His 512 | - | expression tag |
| His 513 | - | expression tag |
| His 514 | - | expression tag |
| His 515 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 54459.3 | |
| Non-Polymers* | Number of molecules | 37 |
| Total formula weight | 2927.9 | |
| All* | Total formula weight | 57387.1 |
