6HLX
Structure of the PBP AgaA in complex with agropinic acid from A.tumefacien R10
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | AgaA | polymer | 492 | 54459.3 | 1 | UniProt (O50260) Pfam (PF00496) In PDB | Rhizobium radiobacter (Agrobacterium tumefaciens) | Peptide ABC transporter substrate-binding protein,Peptide/nickel transport system substrate-binding protein |
2 | A | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
3 | A | agropinic acid | non-polymer | 291.3 | 1 | Chemie (G9Z) | |||
4 | A | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
5 | A | ACETATE ION | non-polymer | 59.0 | 7 | Chemie (ACT) | |||
6 | A | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
7 | A | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
8 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 14 | Chemie (EDO) | |||
9 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
10 | water | water | 18.0 | 470 | Chemie (HOH) |
Sequence modifications
A: 25 - 509 (UniProt: O50260)
PDB | External Database | Details |
---|---|---|
Met 24 | - | initiating methionine |
His 510 | - | expression tag |
His 511 | - | expression tag |
His 512 | - | expression tag |
His 513 | - | expression tag |
His 514 | - | expression tag |
His 515 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 54459.3 | |
Non-Polymers* | Number of molecules | 37 |
Total formula weight | 2927.9 | |
All* | Total formula weight | 57387.1 |