6GYP
Cryo-EM structure of the CBF3-core-Ndc10-DBD complex of the budding yeast kinetochore
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B) | Centromere DNA-binding protein complex CBF3 subunit B | polymer | 608 | 71439.9 | 1 | UniProt (P40969) Pfam (PF00172) Pfam (PF16846) | Saccharomyces cerevisiae S288C | Centromere protein 3 |
| 2 | B (A) | Centromere DNA-binding protein complex CBF3 subunit C | polymer | 478 | 56416.9 | 1 | UniProt (P35203) | Saccharomyces cerevisiae S288C | Chromosome transmission fidelity protein 13,Kinetochore protein CTF13 |
| 3 | C (C) | Centromere DNA-binding protein complex CBF3 subunit B | polymer | 564 | 66401.9 | 1 | UniProt (P40969) Pfam (PF16846) | Saccharomyces cerevisiae S288C | Centromere protein 3 |
| 4 | D (D) | Suppressor of kinetochore protein 1 | polymer | 194 | 22357.3 | 1 | UniProt (P52286) Pfam (PF03931) Pfam (PF01466) | Saccharomyces cerevisiae S288C | Centromere DNA-binding protein complex CBF3 subunit D,E3 ubiquitin ligase complex SCF subunit SKP1 |
| 5 | E (E) | Centromere DNA-binding protein complex CBF3 subunit A | polymer | 956 | 112066.0 | 1 | UniProt (P32504) Pfam (PF21400) Pfam (PF16787) Pfam (PF12550) | Saccharomyces cerevisiae S288C | Centromere-binding factor 2,Chromosome transmission fidelity protein 14,Kinetochore protein CTF14 |
| 6 | F (B) | METHIONINE | non-polymer | 149.2 | 1 | Chemie (MET) | |||
| 7 | G (B) | PHENYLALANINE | non-polymer | 165.2 | 1 | Chemie (PHE) | |||
| 8 | H (B) | ASPARAGINE | non-polymer | 132.1 | 1 | Chemie (ASN) | |||
| 9 | I (B) | ARGININE | non-polymer | 175.2 | 1 | Chemie (ARG) | |||
| 10 | J, K (B) | THREONINE | non-polymer | 119.1 | 2 | Chemie (THR) | |||
| 11 | L (B) | GLUTAMINE | non-polymer | 146.1 | 1 | Chemie (GLN) |
Sequence modifications
C: 49 - 608 (UniProt: P40969)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Phe 2 | - | expression tag |
| Asn 3 | - | expression tag |
| Arg 4 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 328681.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1006.1 | |
| All* | Total formula weight | 329688.0 |
