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6GHV

Structure of a DC-SIGN CRD in complex with high affinity glycomimetic.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
CD209 antigenpolymer15517746.66UniProt (Q9NNX6)
Pfam (PF00059)
Homo sapiens (Human)C-type lectin domain family 4 member L,Dendritic cell-specific ICAM-3-grabbing non-integrin 1,DC-SIGN1
2AA, G, HA, N, NA...
(D, A, E, B, F...)
[1-[(2~{S},3~{S},4~{R},5~{S},6~{R})-2-[(1~{S},2~{S},4~{S},5~{S})-2-(2-chloroethyloxy)-4,5-bis[[4-(hydroxymethyl)phenyl]methylcarbamoyl]cyclohexyl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-1,2,3-triazol-4-yl]methylazaniumnon-polymer748.26Chemie (EZ8)
3BA, CA, DA, H, I...
(D, A, E, B, F...)
CALCIUM IONnon-polymer40.118Chemie (CA)
4EA, FA, GA, K, L...
(D, E, A, F, B...)
CHLORIDE IONnon-polymer35.514Chemie (CL)
5SA, TA, UA, VA, WA...
(A, B, C, D, E...)
waterwater18.0660Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight106479.5
Non-Polymers*Number of molecules38
Total formula weight5707.2
All*Total formula weight112186.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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