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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6FXC

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

This is a non-PDB format compatible entry.
Replaces:  5NG8
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1Aa, Ba16S ribosomal RNApolymer1539498060.02GenBank (1248686583)Staphylococcus aureus
2Ab, Bb30S ribosomal protein S2polymer22625929.12UniProt (Q2YXL2)
Pfam (PF00318)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
3Ac, Bc30S ribosomal protein S3polymer20222684.22UniProt (Q2YYQ2)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
4Ad, Bd30S ribosomal protein S4polymer19822849.12UniProt (Q2YTH0)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
5Ae, Be30S ribosomal protein S5polymer15616522.12UniProt (Q2YYL4)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
6Af, Bf30S ribosomal protein S6polymer9511239.82UniProt (Q2YVJ2)
Pfam (PF01250)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
7Ag, Bg30S ribosomal protein S7polymer15217181.82UniProt (A0A077VHU6)
Pfam (PF00177)
In PDB		Staphylococcus aureus
8Ah, Bh30S ribosomal protein S8polymer13114723.12UniProt (Q2YYL1)
Pfam (PF00410)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
9Ai, Bi30S ribosomal protein S9polymer12714312.32UniProt (A0A1Q4GY48)
Pfam (PF00380)
In PDB		Staphylococcus aureus
10Aj, Bj30S ribosomal protein S10polymer9711009.72UniProt (Q2YYP5)
Pfam (PF00338)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
11Ak, Bk30S ribosomal protein S11polymer11412047.62UniProt (Q2YYM1)
Pfam (PF00411)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
12Al, Bl30S ribosomal protein S12polymer13515075.62UniProt (A0A133PZQ5)
Pfam (PF00164)
In PDB		Staphylococcus aureus
13Am, Bm30S ribosomal protein S13polymer12113747.92UniProt (Q2YYM0)
Pfam (PF00416)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
14An, Bn30S ribosomal protein S14 type Zpolymer607186.62UniProt (Q2YYL0)
Pfam (PF00253)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
15Ao, Bo30S ribosomal protein S15polymer8810503.12UniProt (Q2YXP3)
Pfam (PF00312)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
16Ap, Bp30S ribosomal protein S16polymer899993.52UniProt (Q2YXH8)
Pfam (PF00886)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
17Aq, Bq30S ribosomal protein S17polymer809366.92UniProt (Q2YYK6)
Pfam (PF00366)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
18Ar, Br30S ribosomal protein S18polymer546404.62UniProt (A0A1D4K9U8)
In PDB		Staphylococcus aureus
19As, Bs30S ribosomal protein S19polymer809205.62UniProt (A0A133PYC3)
Pfam (PF00203)
In PDB		Staphylococcus aureus
20At, Bt30S ribosomal protein S20polymer818779.12UniProt (Q2YT41)
Pfam (PF01649)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
21Au, Bu30S ribosomal protein S21polymer526241.32UniProt (Q2YT04)
Pfam (PF01165)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
22Av, BvRibosome hibernation promotion factorpolymer19022244.92UniProt (Q2YSH7)
Pfam (PF02482)
Pfam (PF16321)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)HPF
23AA, BA23S ribosomal RNApolymer2923946697.62GenBank (743649775)Staphylococcus aureus
24AB, BB5S ribosomal RNApolymer11536974.92GenBank (1269120188)Staphylococcus aureus
25AC, BC50S ribosomal protein L2polymer27429827.62UniProt (Q2YYP9)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
26AD, BD50S ribosomal protein L3polymer21523199.52UniProt (Q2YYP6)
Pfam (PF00297)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
27AE, BE50S ribosomal protein L4polymer20622364.52UniProt (Q2YYP7)
Pfam (PF00573)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
28AF, BF50S ribosomal protein L5polymer17519731.92UniProt (Q2YYK9)
Pfam (PF00673)
Pfam (PF00281)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
29AG, BG50S ribosomal protein L6polymer17519501.22UniProt (Q2YYL2)
Pfam (PF00347)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
30AH, BH50S ribosomal protein L13polymer14516359.42UniProt (Q2YYM8)
Pfam (PF00572)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
31AI, BI50S ribosomal protein L14polymer12213157.32UniProt (Q2YYK7)
Pfam (PF00238)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
32AJ, BJ50S ribosomal protein L15polymer14615628.92UniProt (Q2YYL6)
Pfam (PF00828)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
33AK, BK50S ribosomal protein L16polymer13715599.42UniProt (Q2YYQ3)
Pfam (PF00252)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
34AL, BL50S ribosomal protein L17polymer12013583.52UniProt (Q2YYM3)
Pfam (PF01196)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
35AM, BM50S ribosomal protein L18polymer11913124.12UniProt (W8TRE0)
Pfam (PF00861)
In PDB		Staphylococcus aureus
36AN, BN50S ribosomal protein L19polymer11413104.42UniProt (Q2YXM4)
Pfam (PF01245)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
37AO, BO50S ribosomal protein L20polymer11613459.92UniProt (Q2YTB1)
Pfam (PF00453)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
38AP, BP50S ribosomal protein L21polymer10211354.12UniProt (Q2YT83)
Pfam (PF00829)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
39AQ, BQ50S ribosomal protein L22polymer11212328.42UniProt (Q2YYQ1)
Pfam (PF00237)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
40AR, BR50S ribosomal protein L23polymer8910380.12UniProt (Q2YYP8)
Pfam (PF00276)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
41AS, BS50S ribosomal protein L24polymer10311316.22UniProt (Q2YYK8)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
42AT, BT50S ribosomal protein L25polymer9410462.22UniProt (A0A133Q8Z9)
Pfam (PF01386)
In PDB		Staphylococcus aureusGeneral stress protein CTC
43AU, BU50S ribosomal protein L27polymer828911.12UniProt (A0A0U1N012)
In PDB		Staphylococcus aureus
44AV, BV50S ribosomal protein L28polymer586550.72UniProt (Q2YXJ2)
Pfam (PF00830)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
45AW, BW50S ribosomal protein L29polymer677845.92UniProt (Q2YYN0)
Pfam (PF00831)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
46AX, BX50S ribosomal protein L30polymer586434.52UniProt (Q2YYL5)
Pfam (PF00327)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
47AY, BY50S ribosomal protein L31 type Bpolymer596909.72UniProt (Q2YUN3)
Pfam (PF01197)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
48AZ, BZ50S ribosomal protein L32polymer485569.62UniProt (A0A1Q8DAT0)
In PDB		Staphylococcus aureus
49A1, B150S ribosomal protein L33polymer475684.62UniProt (A0A077V2P0)
Pfam (PF00471)
In PDB		Staphylococcus aureus
50A2, B250S ribosomal protein L34polymer435252.42UniProt (Q2YZB6)
Pfam (PF00468)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
51A3, B350S ribosomal protein L35polymer647462.02UniProt (Q2YTB0)
Pfam (PF01632)
In PDB		Staphylococcus aureus (strain bovine RF122 / ET3-1)
52A4, B450S ribosomal protein L36polymer374318.42UniProt (A0A077UGV8)
Pfam (PF00444)
In PDB		Staphylococcus aureus
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains104
Total formula weight4236804.3
All*Total formula weight4236804.3
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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