6FDQ
Structure of Chlamydia trachomatis effector protein Cdu1 bound to Compound 5
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | Deubiquitinase and deneddylase Dub1 | polymer | 266 | 30534.4 | 2 | UniProt (B0B9A0) Pfam (PF02902) | Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) | ChlaDub1 |
2 | C, D (A, B) | N-benzyl-2-[(Z)-iminomethyl]pyrimidine-5-carboxamide | non-polymer | 240.3 | 2 | Chemie (2UQ) | |||
3 | E, F (A, B) | water | water | 18.0 | 153 | Chemie (HOH) |
Sequence modifications
A, B: 155 - 401 (UniProt: B0B9A0)
PDB | External Database | Details |
---|---|---|
Met 136 | - | initiating methionine |
Lys 137 | - | expression tag |
His 138 | - | expression tag |
His 139 | - | expression tag |
His 140 | - | expression tag |
His 141 | - | expression tag |
His 142 | - | expression tag |
His 143 | - | expression tag |
Ser 144 | - | expression tag |
Ala 145 | - | expression tag |
Gly 146 | - | expression tag |
Leu 147 | - | expression tag |
Glu 148 | - | expression tag |
Val 149 | - | expression tag |
Leu 150 | - | expression tag |
Phe 151 | - | expression tag |
Gln 152 | - | expression tag |
Gly 153 | - | expression tag |
Pro 154 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 61068.7 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 480.5 | |
All* | Total formula weight | 61549.2 |